| Human synonyms | PDCD10 | CCM3|TFAR15 | GeneID:11235 | ENSG00000114209 | Q9BUL8 |
| Mouse ortholog | Pdcd10 | 2410003B13Rik|Ccm3|Tfa1|Tfa15|Tfar15 | GeneID:56426 | ENSMUSG00000027835 | Q8VE70 |
| Tissue Atlas Coexpression | human GTEx RNA, mouse GNFv3 RNA, mouse protein |
| CCLE cell lines | CRISPR-codependency, RNA-seq coexpression, RNA-microarray, CRISPR-vs-RNA-seq |
| Sequence Alignment (MitoCarta only) | all_BBH, selected_BBH |
| In MitoCarta3.0? | 0 |
| Evidence | 0 |
| MitoPathway | |
| Sub-Mito Localization | |
| MS/MS tissues | brainstem |
| MitoCarta2.0 FDR | 0.869 |
| MitoCarta2.0 Training | Tnon_mito |
| TargetP_v1 MTS Confidence | |
| MitoDomain | NonMitoDomain |
| Yeast Homolog | NoMitoHomolog |
| Rickettsia Homolog | NoHomolog |
| GeneAtlas Coexpression N50 | 0 |
| PGC Induction | |
| MSMS score | 0-25ambig |
| MSMS intensity | cerebrum:, cerebellum:, brainstem:7.6, spinalcord:, kidney:, liver:, heart:, muscle:, adipose:, sm_intestine:, lg_intestine:, stomach:, placenta:, testis: |
| MSMS unique peps | 2 |
| Curator notes |
| HPA Main Location (2020) | |
| PFAM domains (2022) | DUF1241 |
| CRISPR guides |
| Glu/Gal Death Screen (2016) | not strongly enriched in Gal/Glu dead cells (fdr=1) |
| O2 Screen Summary (2020) | not selectively essential in 1% vs 21% oxygen (fdr=1) |
| 1%O2_vs_21%O2.day15.score (2020) | 0 |
| 21%O2.day15_vs_day0.score (2020) | 0 |
| Chemical Genetics Zscore (To 2019) | |
| TMRM Oligo Zscore (unpublished) | -1.8 |
| Species | mRNA | ProteinID | Len (AA) | TargetP v1.0 | TargetP v2.0 | TPpred2 | MitoFates | Mouse Best | TMHMM # Helices | TMHMM Topology |
|---|---|---|---|---|---|---|---|---|---|---|
| human | NM_145860 | NP_665859 | 212 | no pred (conf=2) | noTP | noMTS (score=1) | 0 | o | ||
| human | NM_145859 | NP_665858 | 212 | no pred (conf=2) | noTP | noMTS (score=1) | 0 | o | ||
| human | NM_007217 | NP_009148 | 212 | no pred (conf=2) | noTP | noMTS (score=1) | 0 | o | ||
| mouse | NM_019745 | NP_062719 | 212 | no pred (conf=2) | noTP | noMTS (score=1) | 0 | o |
