Variant CNV_M2_HG19_6_132019328_132035259_7_143953514_143969444
Location: chr6:132019328-132035259 (15Kb), chr7:143953514-143969444 (15Kb), distance: NA
Site classification: Multi-allelic
Variant DCN frequency: 0.720
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.720
Genes Overlapped
ARHGEF35 | INTRON | rho guanine nucleotide exchange factor 35 |
CTAGE8 | GENE | NA |
CTAGE9 | GENE | cutaneous T-cell lymphoma-associated antigen 9 |
ENPP3 | INTRON | ectonucleotide pyrophosphatase/phosphodiesterase family member 3 |
OR2A4 | GENE | olfactory receptor 2A4 |
OR2A7 | GENE | olfactory receptor 2A7 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 CN10 CN11 CN12 ASW 0 0 0 0 8 19 11 7 0 0 0 0 0 CEU 0 0 0 0 14 21 11 14 4 2 0 0 0 CHB 0 0 0 0 7 16 14 23 11 4 3 0 0 CHS 0 0 0 1 9 12 27 27 10 3 1 0 1 CLM 0 0 0 5 5 9 16 8 3 2 0 1 0 FIN 0 0 0 0 14 20 16 6 5 0 1 0 0 GBR 0 0 0 0 8 15 12 11 2 3 3 0 0 IBS 0 0 0 0 2 3 0 0 0 1 0 0 0 JPT 0 0 0 0 2 18 21 18 9 1 0 0 0 LWK 0 0 0 3 20 22 10 8 1 3 2 0 0 MXL 0 0 0 2 9 12 15 11 2 3 0 0 0 PUR 0 0 0 3 9 10 13 9 6 1 1 0 0 TSI 0 0 0 0 7 26 24 18 4 4 0 0 0 YRI 0 0 0 1 23 25 13 5 4 0 0 0 0 AFR 0 0 0 4 43 47 23 13 5 3 2 0 0 AFR+ 0 0 0 4 51 66 34 20 5 3 2 0 0 AMR 0 0 0 10 23 31 44 28 11 6 1 1 0 ASN 0 0 0 1 18 46 62 68 30 8 4 0 1 EUR 0 0 0 0 45 85 63 49 15 10 4 0 0 ALL 0 0 0 15 137 228 203 165 61 27 11 1 1
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 CN10 CN11 CN12 ASW 0 0 0 0 7 16 5 5 0 0 0 0 0 CEU 0 0 0 0 10 17 9 10 4 2 0 0 0 CHB 0 0 0 0 7 11 12 20 6 1 2 0 0 CHS 0 0 0 1 6 11 14 17 4 0 0 0 1 CLM 0 0 0 5 5 5 8 7 0 0 0 1 0 FIN 0 0 0 0 11 12 10 3 2 0 0 0 0 GBR 0 0 0 0 7 9 10 5 0 2 2 0 0 IBS 0 0 0 0 2 2 0 0 0 1 0 0 0 JPT 0 0 0 0 2 14 17 17 3 1 0 0 0 LWK 0 0 0 2 15 18 6 4 0 1 0 0 0 MXL 0 0 0 2 8 6 12 7 1 2 0 0 0 PUR 0 0 0 3 8 8 10 5 3 1 1 0 0 TSI 0 0 0 0 6 18 21 14 2 2 0 0 0 YRI 0 0 0 1 21 24 10 3 4 0 0 0 0 AFR 0 0 0 3 36 42 16 7 4 1 0 0 0 AFR+ 0 0 0 3 43 58 21 12 4 1 0 0 0 AMR 0 0 0 10 21 19 30 19 4 3 1 1 0 ASN 0 0 0 1 15 36 43 54 13 2 2 0 1 EUR 0 0 0 0 36 58 50 32 8 7 2 0 0 ALL 0 0 0 14 115 171 144 117 29 13 5 1 1
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI