Variant CNV_M1_HG19_20_60186456_60190378

Location: chr20:60186456-60190378 (3.9Kb)
Site classification: Deletion
Variant DCN frequency: 0.004

Genes Overlapped
CDH4 INTRON cadherin-4 isoform 3


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	66	0
CHB	0	0	77	1
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	1	68	0
MXL	0	0	54	0
PUR	0	0	51	1
TSI	0	0	83	0
YRI	0	2	69	0

AFR	0	3	137	0
AFR+	0	3	182	0
AMR	0	0	154	1
ASN	0	0	237	1
EUR	0	0	271	0

ALL	0	3	844	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	77
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	53
IBS	0	0	6
JPT	0	0	69
LWK	0	1	68
MXL	0	0	54
PUR	0	0	51
TSI	0	0	83
YRI	0	2	69

AFR	0	3	137
AFR+	0	3	182
AMR	0	0	154
ASN	0	0	237
EUR	0	0	270

ALL	0	3	843
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI