Variant CNV_M1_HG19_1_17998886_18003060

Location: chr1:17998886-18003060 (4.2Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.012

Genes Overlapped
ARHGEF10L INTRON rho guanine nucleotide exchange factor 10-like protein


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	1	44	0
CEU	0	0	65	1
CHB	0	0	77	1
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	67	2
LWK	0	2	64	3
MXL	0	0	54	0
PUR	0	1	51	0
TSI	0	0	75	8
YRI	0	0	69	2

AFR	0	2	133	5
AFR+	0	3	177	5
AMR	0	1	154	0
ASN	0	0	235	3
EUR	0	0	262	9

ALL	0	4	828	17
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	44	0
CEU	0	0	60	0
CHB	0	0	75	0
CHS	0	0	89	0
CLM	0	0	48	0
FIN	0	0	61	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	63	1
LWK	0	1	62	0
MXL	0	0	54	0
PUR	0	1	51	0
TSI	0	0	64	6
YRI	0	0	69	1

AFR	0	1	131	1
AFR+	0	1	175	1
AMR	0	1	153	0
ASN	0	0	227	1
EUR	0	0	245	6

ALL	0	2	800	8
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI