Variant CNV_M1_HG19_16_5124642_5145893

Location: chr16:5124642-5145893 (21Kb)
Site classification: Deletion
Variant DCN frequency: 0.002

Genes Overlapped
ALG1 CDS chitobiosyldiphosphodolichol beta-mannosyltransferase precursor
FAM86A CDS protein FAM86A


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	2	50
TSI	0	0	83
YRI	0	0	71

AFR	0	0	140
AFR+	0	0	185
AMR	0	2	153
ASN	0	0	238
EUR	0	0	271

ALL	0	2	847
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	53
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	2	50
TSI	0	0	83
YRI	0	0	71

AFR	0	0	140
AFR+	0	0	185
AMR	0	2	153
ASN	0	0	238
EUR	0	0	270

ALL	0	2	846
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI