clear; clf; 
hold on;
%% Plotting the boundaries for Scer chr2
plot([795000,818140],[-5000,-5000],'k-');
plot([795000,795000],[-4500,-5500],'k-');
plot([818140,818140],[-4500,-5500],'k-');
%% Text at position 818140,-5300:  Scer chr2
h = text(818140.0, -5300.0, 'Scer chr2');
set(h,'VerticalAlignment','top')
set(h,'HorizontalAlignment','right')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
%% Hooks at the end of Scer chr2
plot([795000,795000,795000],[-5500,-5500,-5400],'k-');
plot([818140,818140,818140],[-4500,-4500,-4600],'k-');
%% 
%% Arrow from [792805,796455] to [-5000,-5000].  Width 300, indent 400, length 3650
fill([792805.00,796055.00,796455.00,796055.00,792805.00,792805.00], ...
	[-5300.00,-5300.00,-5000.00,-4700.00,-4700.00,-5300.00], 'r-');
%% Text at position 794630,-4700:  YBR295W (PCA1)
h = text(794630.0, -4700.0, 'YBR295W (PCA1)');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [798478,796754] to [-5000,-5000].  Width 300, indent 400, length 1724
fill([798478.00,797154.00,796754.00,797154.00,798478.00,798478.00], ...
	[-4700.00,-4700.00,-5000.00,-5300.00,-5300.00,-4700.00], 'r-');
%% Text at position 797616,-4700:  YBR296C (PHO89)
h = text(797616.0, -4700.0, 'YBR296C (PHO89)');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [800479,801885] to [-5000,-5000].  Width 300, indent 400, length 1406
fill([800479.00,801485.00,801885.00,801485.00,800479.00,800479.00], ...
	[-5300.00,-5300.00,-5000.00,-4700.00,-4700.00,-5300.00], 'r-');
%% Text at position 801182,-4700:  YBR297W (MAL33)
h = text(801182.0, -4700.0, 'YBR297W (MAL33)');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [804431,802587] to [-5000,-5000].  Width 300, indent 400, length 1844
fill([804431.00,802987.00,802587.00,802987.00,804431.00,804431.00], ...
	[-4700.00,-4700.00,-5000.00,-5300.00,-5300.00,-4700.00], 'b-');
%% Text at position 803509,-4700:  YBR298C (MAL31)
h = text(803509.0, -4700.0, 'YBR298C (MAL31)');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [805307,807061] to [-5000,-5000].  Width 300, indent 400, length 1754
fill([805307.00,806661.00,807061.00,806661.00,805307.00,805307.00], ...
	[-5300.00,-5300.00,-5000.00,-4700.00,-4700.00,-5300.00], 'b-');
%% Text at position 806184,-4700:  YBR299W (MAL32)
h = text(806184.0, -4700.0, 'YBR299W (MAL32)');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [809053,808556] to [-5000,-5000].  Width 300, indent 400, length 497
fill([809053.00,808956.00,808556.00,808956.00,809053.00,809053.00], ...
	[-4700.00,-4700.00,-5000.00,-5300.00,-5300.00,-4700.00], 'b-');
%% Text at position 808804,-4700:  YBR300C
h = text(808804.0, -4700.0, 'YBR300C');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [809013,809375] to [-5000,-5000].  Width 300, indent 325.8, length 362
fill([809013.00,809049.20,809375.00,809049.20,809013.00,809013.00], ...
	[-5300.00,-5300.00,-5000.00,-4700.00,-4700.00,-5300.00], 'b-');
%% Text at position 809194,-4700:  YBR301W
h = text(809194.0, -4700.0, 'YBR301W');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [811435,810296] to [-5000,-5000].  Width 300, indent 400, length 1139
fill([811435.00,810696.00,810296.00,810696.00,811435.00,811435.00], ...
	[-4700.00,-4700.00,-5000.00,-5300.00,-5300.00,-4700.00], 'b-');
%% Text at position 810865,-4700:  YBR302C (COS2)
h = text(810865.0, -4700.0, 'YBR302C (COS2)');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% Plotting the boundaries for Spar contig214
plot([780000,803019.5],[-10000,-10000],'k-');
plot([780000,780000],[-9500,-10500],'k-');
plot([803019.5,803019.5],[-9500,-10500],'k-');
%% Text at position 803019.5,-10300:  Spar contig214
h = text(803019.5, -10300.0, 'Spar contig214');
set(h,'VerticalAlignment','top')
set(h,'HorizontalAlignment','right')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
%% Hooks at the end of Spar contig214
plot([780000,780051,780051],[-10500,-10500,-10400],'k-');
plot([803019.5,803539.5,803539.5],[-9500,-9500,-9600],'k-');
%% 
%% Arrow from [782773.5,783741.5] to [-10000,-10000].  Width 300, indent 400, length 968
fill([782773.50,783341.50,783741.50,783341.50,782773.50,782773.50], ...
	[-10300.00,-10300.00,-10000.00,-9700.00,-9700.00,-10300.00], 'r-');
%% Text at position 783257.5,-9700:  YBR290W
h = text(783257.5, -9700.0, 'YBR290W');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [784759.5,783860.5] to [-10000,-10000].  Width 300, indent 400, length 899
fill([784759.50,784260.50,783860.50,784260.50,784759.50,784759.50], ...
	[-9700.00,-9700.00,-10000.00,-10300.00,-10300.00,-9700.00], 'r-');
%% Text at position 784309.5,-9700:  YBR291C
h = text(784309.5, -9700.0, 'YBR291C');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [785772.5,786143.5] to [-10000,-10000].  Width 300, indent 333.9, length 371
fill([785772.50,785809.60,786143.50,785809.60,785772.50,785772.50], ...
	[-10300.00,-10300.00,-10000.00,-9700.00,-9700.00,-10300.00], 'w-');
%% Text at position 785957.5,-9700:  NoHit2111
h = text(785957.5, -9700.0, 'NoHit2111');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [786589.5,788283.5] to [-10000,-10000].  Width 300, indent 400, length 1694
fill([786589.50,787883.50,788283.50,787883.50,786589.50,786589.50], ...
	[-10300.00,-10300.00,-10000.00,-9700.00,-9700.00,-10300.00], 'r-');
%% Text at position 787436.5,-9700:  YBR293W
h = text(787436.5, -9700.0, 'YBR293W');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [789055.5,791649.5] to [-10000,-10000].  Width 300, indent 400, length 2594
fill([789055.50,791249.50,791649.50,791249.50,789055.50,789055.50], ...
	[-10300.00,-10300.00,-10000.00,-9700.00,-9700.00,-10300.00], 'r-');
%% Text at position 790352.5,-9700:  YBR294W
h = text(790352.5, -9700.0, 'YBR294W');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [792694.5,796368.5] to [-10000,-10000].  Width 300, indent 400, length 3674
fill([792694.50,795968.50,796368.50,795968.50,792694.50,792694.50], ...
	[-10300.00,-10300.00,-10000.00,-9700.00,-9700.00,-10300.00], 'r-');
%% Text at position 794531.5,-9700:  
h = text(794531.5, -9700.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [798588.5,796864.5] to [-10000,-10000].  Width 300, indent 400, length 1724
fill([798588.50,797264.50,796864.50,797264.50,798588.50,798588.50], ...
	[-9700.00,-9700.00,-10000.00,-10300.00,-10300.00,-9700.00], 'r-');
%% Text at position 797726.5,-9700:  
h = text(797726.5, -9700.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [800713.5,802119.5] to [-10000,-10000].  Width 300, indent 400, length 1406
fill([800713.50,801719.50,802119.50,801719.50,800713.50,800713.50], ...
	[-10300.00,-10300.00,-10000.00,-9700.00,-9700.00,-10300.00], 'r-');
%% Text at position 801416.5,-9700:  
h = text(801416.5, -9700.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [802314.5,802478.5] to [-10000,-10000].  Width 300, indent 147.6, length 164
fill([802314.50,802330.90,802478.50,802330.90,802314.50,802314.50], ...
	[-10300.00,-10300.00,-10000.00,-9700.00,-9700.00,-10300.00], 'r-');
%% Text at position 802396.5,-9700:  
h = text(802396.5, -9700.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% Plotting the boundaries for Spar contig215
plot([808006,810733],[-10700,-10700],'k-');
plot([808006,808006],[-10200,-11200],'k-');
plot([810733,810733],[-10200,-11200],'k-');
%% Text at position 810733,-11000:  Spar contig215
h = text(810733.0, -11000.0, 'Spar contig215');
set(h,'VerticalAlignment','top')
set(h,'HorizontalAlignment','right')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
%% Hooks at the end of Spar contig215
plot([808006,807486,807486],[-11200,-11200,-11100],'k-');
plot([810733,810733,810733],[-10200,-10200,-10300],'k-');
%% 
%% Arrow from [808799,808584] to [-10700,-10700].  Width 300, indent 193.5, length 215
fill([808799.00,808777.50,808584.00,808777.50,808799.00,808799.00], ...
	[-10400.00,-10400.00,-10700.00,-11000.00,-11000.00,-10400.00], 'g-');
%% Text at position 808691,-10400:  YGR293C
h = text(808691.0, -10400.0, 'YGR293C');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [808911,808654] to [-10700,-10700].  Width 300, indent 231.3, length 257
fill([808911.00,808885.30,808654.00,808885.30,808911.00,808911.00], ...
	[-10400.00,-10400.00,-10700.00,-11000.00,-11000.00,-10400.00], 'r-');
%% Text at position 808782,-10400:  
h = text(808782.0, -10400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [809013,809375] to [-10700,-10700].  Width 300, indent 325.8, length 362
fill([809013.00,809049.20,809375.00,809049.20,809013.00,809013.00], ...
	[-11000.00,-11000.00,-10700.00,-10400.00,-10400.00,-11000.00], 'r-');
%% Text at position 809194,-10400:  
h = text(809194.0, -10400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [809624,809917] to [-10700,-10700].  Width 300, indent 263.7, length 293
fill([809624.00,809653.30,809917.00,809653.30,809624.00,809624.00], ...
	[-11000.00,-11000.00,-10700.00,-10400.00,-10400.00,-11000.00], 'w-');
%% Text at position 809770,-10400:  NoHit2135
h = text(809770.0, -10400.0, 'NoHit2135');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [810457,810158] to [-10700,-10700].  Width 300, indent 269.1, length 299
fill([810457.00,810427.10,810158.00,810427.10,810457.00,810457.00], ...
	[-10400.00,-10400.00,-10700.00,-11000.00,-11000.00,-10400.00], 'r-');
%% Text at position 810307,-10400:  
h = text(810307.0, -10400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% Plotting the boundaries for Smik contig699
plot([784501.5,802604.5],[-15700,-15700],'k-');
plot([784501.5,784501.5],[-15200,-16200],'k-');
plot([802604.5,802604.5],[-15200,-16200],'k-');
%% Text at position 802604.5,-16000:  Smik contig699
h = text(802604.5, -16000.0, 'Smik contig699');
set(h,'VerticalAlignment','top')
set(h,'HorizontalAlignment','right')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
%% Hooks at the end of Smik contig699
plot([784501.5,784258.5,784258.5],[-16200,-16200,-16100],'k-');
plot([802604.5,802992.5,802992.5],[-15200,-15200,-15300],'k-');
%% 
%% Arrow from [786867.5,788573.5] to [-15700,-15700].  Width 300, indent 400, length 1706
fill([786867.50,788173.50,788573.50,788173.50,786867.50,786867.50], ...
	[-16000.00,-16000.00,-15700.00,-15400.00,-15400.00,-16000.00], 'r-');
%% Text at position 787720.5,-15400:  
h = text(787720.5, -15400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [789344.5,791935.5] to [-15700,-15700].  Width 300, indent 400, length 2591
fill([789344.50,791535.50,791935.50,791535.50,789344.50,789344.50], ...
	[-16000.00,-16000.00,-15700.00,-15400.00,-15400.00,-16000.00], 'r-');
%% Text at position 790639.5,-15400:  
h = text(790639.5, -15400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [792776.5,796339.5] to [-15700,-15700].  Width 300, indent 400, length 3563
fill([792776.50,795939.50,796339.50,795939.50,792776.50,792776.50], ...
	[-16000.00,-16000.00,-15700.00,-15400.00,-15400.00,-16000.00], 'r-');
%% Text at position 794557.5,-15400:  
h = text(794557.5, -15400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [797315.5,796728.5] to [-15700,-15700].  Width 300, indent 400, length 587
fill([797315.50,797128.50,796728.50,797128.50,797315.50,797315.50], ...
	[-15400.00,-15400.00,-15700.00,-16000.00,-16000.00,-15400.00], 'b-');
%% Text at position 797021.5,-15400:  YBR296C
h = text(797021.5, -15400.0, 'YBR296C');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [798450.5,797452.5] to [-15700,-15700].  Width 300, indent 400, length 998
fill([798450.50,797852.50,797452.50,797852.50,798450.50,798450.50], ...
	[-15400.00,-15400.00,-15700.00,-16000.00,-16000.00,-15400.00], 'b-');
%% Text at position 797951.5,-15400:  YBR296C
h = text(797951.5, -15400.0, 'YBR296C');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [799185.5,798892.5] to [-15700,-15700].  Width 300, indent 263.7, length 293
fill([799185.50,799156.20,798892.50,799156.20,799185.50,799185.50], ...
	[-15400.00,-15400.00,-15700.00,-16000.00,-16000.00,-15400.00], 'w-');
%% Text at position 799038.5,-15400:  NoHit4821
h = text(799038.5, -15400.0, 'NoHit4821');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [800504.5,801913.5] to [-15700,-15700].  Width 300, indent 400, length 1409
fill([800504.50,801513.50,801913.50,801513.50,800504.50,800504.50], ...
	[-16000.00,-16000.00,-15700.00,-15400.00,-15400.00,-16000.00], 'r-');
%% Text at position 801208.5,-15400:  
h = text(801208.5, -15400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [802518.5,802333.5] to [-15700,-15700].  Width 300, indent 166.5, length 185
fill([802518.50,802500.00,802333.50,802500.00,802518.50,802518.50], ...
	[-15400.00,-15400.00,-15700.00,-16000.00,-16000.00,-15400.00], 'g-');
%% Text at position 802425.5,-15400:  YOL156W
h = text(802425.5, -15400.0, 'YOL156W');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% Plotting the boundaries for Sbay contig596
plot([780000,815222],[-20700,-20700],'k-');
plot([780000,780000],[-20200,-21200],'k-');
plot([815222,815222],[-20200,-21200],'k-');
%% Text at position 815222,-21000:  Sbay contig596
h = text(815222.0, -21000.0, 'Sbay contig596');
set(h,'VerticalAlignment','top')
set(h,'HorizontalAlignment','right')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
%% Hooks at the end of Sbay contig596
plot([780000,780000,780000],[-21200,-21200,-21100],'k-');
plot([815222,816147,816147],[-20200,-20200,-20300],'k-');
%% 
%% Arrow from [788233,787334] to [-20700,-20700].  Width 300, indent 400, length 899
fill([788233.00,787734.00,787334.00,787734.00,788233.00,788233.00], ...
	[-20400.00,-20400.00,-20700.00,-21000.00,-21000.00,-20400.00], 'r-');
%% Text at position 787783,-20400:  
h = text(787783.0, -20400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [789194,789514] to [-20700,-20700].  Width 300, indent 288.0, length 320
fill([789194.00,789226.00,789514.00,789226.00,789194.00,789194.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'w-');
%% Text at position 789354,-20400:  NoHit2252
h = text(789354.0, -20400.0, 'NoHit2252');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [789709,789521] to [-20700,-20700].  Width 300, indent 169.2, length 188
fill([789709.00,789690.20,789521.00,789690.20,789709.00,789709.00], ...
	[-20400.00,-20400.00,-20700.00,-21000.00,-21000.00,-20400.00], 'w-');
%% Text at position 789615,-20400:  NoHit2254
h = text(789615.0, -20400.0, 'NoHit2254');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [789645,789869] to [-20700,-20700].  Width 300, indent 201.6, length 224
fill([789645.00,789667.40,789869.00,789667.40,789645.00,789645.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'w-');
%% Text at position 789757,-20400:  NoHit2255
h = text(789757.0, -20400.0, 'NoHit2255');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [791037,792725] to [-20700,-20700].  Width 300, indent 400, length 1688
fill([791037.00,792325.00,792725.00,792325.00,791037.00,791037.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'r-');
%% Text at position 791881,-20400:  
h = text(791881.0, -20400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [793570,796122] to [-20700,-20700].  Width 300, indent 400, length 2552
fill([793570.00,795722.00,796122.00,795722.00,793570.00,793570.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'r-');
%% Text at position 794846,-20400:  
h = text(794846.0, -20400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [798481,796754] to [-20700,-20700].  Width 300, indent 400, length 1727
fill([798481.00,797154.00,796754.00,797154.00,798481.00,798481.00], ...
	[-20400.00,-20400.00,-20700.00,-21000.00,-21000.00,-20400.00], 'r-');
%% Text at position 797617,-20400:  
h = text(797617.0, -20400.0, '');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [802689,800725] to [-20700,-20700].  Width 300, indent 400, length 1964
fill([802689.00,801125.00,800725.00,801125.00,802689.00,802689.00], ...
	[-20400.00,-20400.00,-20700.00,-21000.00,-21000.00,-20400.00], 'r-');
%% Text at position 801707,-20400:  YFL054C
h = text(801707.0, -20400.0, 'YFL054C');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [803706,805481] to [-20700,-20700].  Width 300, indent 400, length 1775
fill([803706.00,805081.00,805481.00,805081.00,803706.00,803706.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'r-');
%% Text at position 804593,-20400:  YFL053W
h = text(804593.0, -20400.0, 'YFL053W');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [807335,807721] to [-20700,-20700].  Width 300, indent 347.4, length 386
fill([807335.00,807373.60,807721.00,807373.60,807335.00,807335.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'w-');
%% Text at position 807528,-20400:  NoHit2285
h = text(807528.0, -20400.0, 'NoHit2285');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [787131,787372] to [-20700,-20700].  Width 300, indent 216.9, length 241
fill([787131.00,787155.10,787372.00,787155.10,787131.00,787131.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'm-');
%% Text at position 787251,-20400:  TyElmt_18 hits at 58%
h = text(787251.0, -20400.0, 'TyElmt_18 hits at 58%');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% Arrow from [805687,806141] to [-20700,-20700].  Width 300, indent 400, length 454
fill([805687.00,805741.00,806141.00,805741.00,805687.00,805687.00], ...
	[-21000.00,-21000.00,-20700.00,-20400.00,-20400.00,-21000.00], 'm-');
%% Text at position 805914,-20400:  TyElmt_29 hits at 53%
h = text(805914.0, -20400.0, 'TyElmt_29 hits at 53%');
set(h,'VerticalAlignment','middle')
set(h,'HorizontalAlignment','left')
set(h,'Interpreter','none')
set(h,'FontName','Times')
set(h,'FontSize',8)
set(h,'Rotation',90)
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[808911..808982..809053]
x_dashed = [...
	809053,808911];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10700..-7850..-5000]
y_dashed = [...
	-5000,-10700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[808556..808605..808654]
x_dashed = [...
	808556,808654];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10700..-7850..-5000]
y_dashed = [...
	-5000,-10700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[810457..810946..811435]
x_dashed = [...
	811435,810457];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10700..-7850..-5000]
y_dashed = [...
	-5000,-10700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[810158..810227..810296]
x_dashed = [...
	810296,810158];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10700..-7850..-5000]
y_dashed = [...
	-5000,-10700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[802314.5..803810.75..805307]
x_dashed = [...
	805307,802314.5];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10000..-7500..-5000]
y_dashed = [...
	-5000,-10000];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[802478.5..804769.75..807061]
x_dashed = [...
	807061,802478.5];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10000..-7500..-5000]
y_dashed = [...
	-5000,-10000];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[809013..809013..809013]
x_dashed = [...
	809013,809013];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10700..-7850..-5000]
y_dashed = [...
	-5000,-10700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[809375..809375..809375]
x_dashed = [...
	809375,809375];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-10700..-7850..-5000]
y_dashed = [...
	-5000,-10700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[784759.5..786496.25..788233]
x_dashed = [...
	784759.5,788233];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-20700..-15350..-10000]
y_dashed = [...
	-10000,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  2 values, [min,avg,max]=[783860.5..785597.25..787334]
x_dashed = [...
	783860.5,787334];
%% Seting variable y_dashed.  2 values, [min,avg,max]=[-20700..-15350..-10000]
y_dashed = [...
	-10000,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  4 values, [min,avg,max]=[798450.5..798499.5..798588.5]
x_dashed = [...
	  798478,798588.5,798450.5,  798481];
%% Seting variable y_dashed.  4 values, [min,avg,max]=[-20700..-12850..-5000]
y_dashed = [...
	-5000,-10000,-15700,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  4 values, [min,avg,max]=[796728.5..796775.25..796864.5]
x_dashed = [...
	  796754,796864.5,796728.5,  796754];
%% Seting variable y_dashed.  4 values, [min,avg,max]=[-20700..-12850..-5000]
y_dashed = [...
	-5000,-10000,-15700,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[786589.5..788164.666667..791037]
x_dashed = [...
	786589.5,786867.5,791037];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-20700..-15467..-10000]
y_dashed = [...
	-10000,-15700,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[788283.5..789860.666667..792725]
x_dashed = [...
	788283.5,788573.5,792725];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-20700..-15467..-10000]
y_dashed = [...
	-10000,-15700,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[792694.5..792758.666667..792805]
x_dashed = [...
	792805,792694.5,792776.5];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-15700..-10234..-5000]
y_dashed = [...
	-5000,-10000,-15700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[796339.5..796387.666667..796455]
x_dashed = [...
	796455,796368.5,796339.5];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-15700..-10234..-5000]
y_dashed = [...
	-5000,-10000,-15700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[789055.5..790656.666667..793570]
x_dashed = [...
	789055.5,789344.5,793570];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-20700..-15467..-10000]
y_dashed = [...
	-10000,-15700,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[791649.5..793235.666667..796122]
x_dashed = [...
	791649.5,791935.5,796122];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-20700..-15467..-10000]
y_dashed = [...
	-10000,-15700,-20700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[800479..800565.666667..800713.5]
x_dashed = [...
	  800479,800713.5,800504.5];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-15700..-10234..-5000]
y_dashed = [...
	-5000,-10000,-15700];
plot(x_dashed, y_dashed, 'k.:')
%% 
%% 
%% Plot x_dashed vs. y_dashed
%% 
%% 
%% Seting variable x_dashed.  3 values, [min,avg,max]=[801885..801972.666667..802119.5]
x_dashed = [...
	  801885,802119.5,801913.5];
%% Seting variable y_dashed.  3 values, [min,avg,max]=[-15700..-10234..-5000]
y_dashed = [...
	-5000,-10000,-15700];
plot(x_dashed, y_dashed, 'k.:')
ax = axis;
axis([ax(1),ax(2),ax(3),0]);
h = gcf;
h2 = get(h,'CurrentAxes');
set(h2,'YAxisLocation','right');
title('Scer ChrII tile 17 positions 800kbp to 813kbp aligned against Spar Smik Sbay');
