### for details please refer to https://docs.google.com/document/d/14aa-oeT5hF541I8hHsDAL_42oyvlHRC5FWR7gir4xco/edit?usp=sharing
###          and https://docs.google.com/spreadsheets/d/1LhNYIXhFi7yXBC17UkjI1KMzHhKYz0j2hwnJECBGZk4/edit?usp=sharing
variable_name                  variable_value
----------------------------------------------
rp_dependencies_dir                              /psych/ripke/share/gio/Ricopili_Dependencies_sr_1118b
R_packages_dir                                   /broad/software/free/Linux/redhat_6_x86_64/pkgs/r_2.14.0/lib64/R/library
starting_R                                       source_SPACE_/broad/software/scripts/useuse;_SPACE_use_SPACE_R-2.15;_SPACE_R
path_to_Perlmodules                              /psych/ripke/share/gio/Ricopili_Dependencies_sr_1018d/perl_modules
path_to_scratchdir                               [fill in here]
starting_ldsc                                    source_SPACE_/broad/software/scripts/useuse;_SPACE_use_SPACE_.anaconda-2.1.0-no-mkl;_SPACE_python_SPACE_/psych/ripke/share/gio/Ricopili_Dependencies_sr_1018d/ldsc
ldsc_reference                                   /psych/ripke/share/gio/Ricopili_Dependencies_sr_1018d/ldsc
rp_user_initials                                 [fill in here]
rp_user_email                                    [fill in here]
rp_logfiles                                      [fill in here]
----------------------------------------
----------------------------------------
---- jobarray and queueing parameters: 
----------------------------------------
----------------------------------------
batch_jobcommand                                 qsub
batch_memory_request                             -l_SPACE_h_vmem=XXXg
batch_walltime                                   -l_SPACE_h_rt=HH:MM:SS
batch_array                                      -t_SPACE_1-XXX
batch_max_parallel_jobs_per_one_array            -tc_SPACE_YYY
batch_jobfile                                    XXX
batch_name                                       -N_SPACE_XXX
batch_stdout                                     -o_SPACE_XXX
batch_stderr                                     -e_SPACE_XXX
batch_job_dependency                             -hold_jid_SPACE_XXX
batch_array_task_id                              $SGE_TASK_ID
batch_other_job_flags        			 -v_SPACE_PATH,rp_perlpackages,RPHOME_SPACE_-l_SPACE_hostname=uger-c*                           
batch_job_output_jid                             Your_SPACE_job-array_SPACE_XXX.1-YYY:1_SPACE("ZZZ")_SPACE_has_SPACE_been_SPACE_submitted,
batch_ncores_per_node                            NA
batch_mem_per_node                               NA