replay.json - contains all technical information and parameters used for the run
cnv.excluded_intervals.bed.gz - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/ExcludeBed.htm
cnv.gff3 - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CNVVisualizationBigWigFiles.htm
cnv.igv_session.xml - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CNVVisualizationBigWigFiles.htm
cnv.vcf.gz - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CNVVisualizationBigWigFiles.htm
cnv_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CNVMetrics.htm
fastqc_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/FASTQC_Intro_fDG.htm
.fragment_length_hist.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/GPipelineMeanIns_fDG.htm
.hard-filtered.baf.bw - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/BAlleleFrequencyOutput_fDG.htm
.improper.pairs.bw - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CNVVisualizationBigWigFiles.htm
.insert-stats.tab - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/GPipelineMeanIns_fDG.htm
.mapping_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.pileup.txt - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.ploidy_estimation_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CoveragePloidyReport_fDG_dtSW.htm
.qc-coverage-region-*_contig_mean_cov.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.qc-coverage-region-*_cov_report.bed - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CoverageReport.htm
.qc-coverage-region-*_coverage_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.qc-coverage-region-*_fine_hist.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.qc-coverage-region-*_hist.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.roh.bed - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/ROHCaller.htm
.roh_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/ROHCaller.htm
.sv_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.target.counts.bw - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/ExcludeBed.htm and https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CNVVisualizationBigWigFiles.htm
.target.counts.gc-corrected.gz - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/BiasCorrections.htm
.target.counts.gz - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/BiasCorrections.htm
.time_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.tn.tsv.gz - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/ExcludeBed.htm and https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CNVVisualizationBigWigFiles.htm
.trimmer_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/ReadTrimming.htm
.vc_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm
.wgs_contig_mean_cov.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CoverageReport.htm
.wgs_coverage_metrics.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/QCMetricsCoverageReports.htm and https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CoverageReport.htm
.wgs_fine_hist.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CoverageReport.htm
.wgs_hist.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CoverageReport.htm
.wgs_overall_mean_cov.csv - https://support-docs.illumina.com/SW/dragen_v42/Content/SW/DRAGEN/CoverageReport.htm