Variant CNV_M2_HG19_9_44176333_44406880_9_46682999_46910407

Location: chr9:44176333-44406880 (230Kb), chr9:46682999-46910407 (227Kb), distance: 2.3Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.210

Genes Overlapped
BX088651.1 GENE NA
BX088651.2 GENE NA


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	3	14	28	0	0	0
CEU	0	0	4	25	36	1	0	0
CHB	0	0	1	19	58	0	0	0
CHS	0	0	6	20	65	0	0	0
CLM	0	0	1	28	20	0	0	0
FIN	0	0	3	22	36	1	0	0
GBR	0	0	1	20	33	0	0	0
IBS	0	0	0	0	6	0	0	0
JPT	0	0	2	20	46	0	0	1
LWK	0	0	5	35	29	0	0	0
MXL	0	0	4	26	24	0	0	0
PUR	0	0	1	15	35	1	0	0
TSI	0	0	0	27	55	1	0	0
YRI	0	0	0	16	54	1	0	0

AFR	0	0	5	51	83	1	0	0
AFR+	0	0	8	65	111	1	0	0
AMR	0	0	6	69	79	1	0	0
ASN	0	0	9	59	169	0	0	1
EUR	0	0	8	94	166	3	0	0

ALL	0	0	31	287	525	5	0	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	2	4	25	0	0	0
CEU	0	0	0	8	32	1	0	0
CHB	0	0	1	14	55	0	0	0
CHS	0	0	1	5	55	0	0	0
CLM	0	0	0	8	16	0	0	0
FIN	0	0	1	2	27	0	0	0
GBR	0	0	0	2	24	0	0	0
IBS	0	0	0	0	4	0	0	0
JPT	0	0	2	15	40	0	0	1
LWK	0	0	3	18	23	0	0	0
MXL	0	0	1	8	21	0	0	0
PUR	0	0	0	2	26	1	0	0
TSI	0	0	0	10	50	1	0	0
YRI	0	0	0	7	51	1	0	0

AFR	0	0	3	25	74	1	0	0
AFR+	0	0	5	29	99	1	0	0
AMR	0	0	1	18	63	1	0	0
ASN	0	0	4	34	150	0	0	1
EUR	0	0	1	22	137	2	0	0

ALL	0	0	11	103	449	4	0	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI