Variant CNV_M2_HG19_7_75069082_75094373_7_76253690_76279029

Location: chr7:75069082-75094373 (25Kb), chr7:76253690-76279029 (25Kb), distance: 1.2Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.010

Genes Overlapped
POM121C CDS nuclear envelope pore membrane protein POM 121C
POMZP3 CDS POM121 and ZP3 fusion protein isoform 1
UPK3B EXON uroplakin-3b isoform c precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	1	42	1	1
CEU	0	0	0	1	65	0	0
CHB	0	0	0	0	77	1	0
CHS	0	0	0	0	91	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	62	0	0
GBR	0	0	0	0	54	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	0	1	68	0	0
MXL	0	0	0	1	53	0	0
PUR	0	0	0	1	51	0	0
TSI	0	0	0	1	82	0	0
YRI	0	0	0	0	67	3	1

AFR	0	0	0	1	135	3	1
AFR+	0	0	0	2	177	4	2
AMR	0	0	0	2	153	0	0
ASN	0	0	0	0	237	1	0
EUR	0	0	0	2	269	0	0

ALL	0	0	0	6	836	5	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	1	42	1	1
CEU	0	0	0	0	65	0	0
CHB	0	0	0	0	76	1	0
CHS	0	0	0	0	90	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	62	0	0
GBR	0	0	0	0	52	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	0	0	67	0	0
MXL	0	0	0	0	53	0	0
PUR	0	0	0	0	49	0	0
TSI	0	0	0	1	82	0	0
YRI	0	0	0	0	65	2	1

AFR	0	0	0	0	132	2	1
AFR+	0	0	0	1	174	3	2
AMR	0	0	0	0	151	0	0
ASN	0	0	0	0	235	1	0
EUR	0	0	0	1	267	0	0

ALL	0	0	0	2	827	4	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI