Variant CNV_M2_HG19_7_29692580_29740677_7_32752291_32800987

Location: chr7:29692580-29740677 (48Kb), chr7:32752291-32800987 (48Kb), distance: 3.0Mb
Site classification: Duplication
Variant DCN frequency: 0.002

Genes Overlapped
AVL9 INTRON late secretory pathway protein AVL9 homolog


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	45	0	0
CEU	0	0	0	0	66	0	0
CHB	0	0	0	0	77	0	1
CHS	0	0	0	0	91	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	62	0	0
GBR	0	0	0	0	54	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	0	0	69	0	0
MXL	0	0	0	0	54	0	0
PUR	0	0	0	0	52	0	0
TSI	0	0	0	0	83	0	0
YRI	0	0	0	0	70	0	1

AFR	0	0	0	0	139	0	1
AFR+	0	0	0	0	184	0	1
AMR	0	0	0	0	155	0	0
ASN	0	0	0	0	237	0	1
EUR	0	0	0	0	271	0	0

ALL	0	0	0	0	847	0	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	45	0	0
CEU	0	0	0	0	66	0	0
CHB	0	0	0	0	77	0	1
CHS	0	0	0	0	91	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	61	0	0
GBR	0	0	0	0	53	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	0	0	69	0	0
MXL	0	0	0	0	54	0	0
PUR	0	0	0	0	52	0	0
TSI	0	0	0	0	83	0	0
YRI	0	0	0	0	70	0	1

AFR	0	0	0	0	139	0	1
AFR+	0	0	0	0	184	0	1
AMR	0	0	0	0	155	0	0
ASN	0	0	0	0	237	0	1
EUR	0	0	0	0	269	0	0

ALL	0	0	0	0	845	0	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI