Variant CNV_M2_HG19_7_143218862_143284234_7_143439416_143504793

Location: chr7:143218862-143284234 (65Kb), chr7:143439416-143504793 (65Kb), distance: 155Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.397

Genes Overlapped
CTAGE15 GENE CTAGE6-like
CTAGE6 GENE cutaneous T-cell lymphoma-associated antigen 6


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	1	3	20	19	2	0
CEU	0	0	0	2	49	12	3	0
CHB	0	0	0	7	50	18	3	0
CHS	0	0	0	17	51	21	2	0
CLM	0	0	0	3	34	8	4	0
FIN	0	0	0	0	40	15	6	1
GBR	0	0	0	4	39	10	1	0
IBS	0	0	0	0	4	2	0	0
JPT	0	0	1	12	40	15	1	0
LWK	0	0	1	7	29	25	7	0
MXL	0	0	1	12	34	6	1	0
PUR	0	0	0	11	34	7	0	0
TSI	0	0	0	4	59	15	4	1
YRI	0	0	0	6	27	27	9	2

AFR	0	0	1	13	56	52	16	2
AFR+	0	0	2	16	76	71	18	2
AMR	0	0	1	26	102	21	5	0
ASN	0	0	1	36	141	54	6	0
EUR	0	0	0	10	191	54	14	2

ALL	0	0	4	88	510	200	43	4
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	1	3	20	19	2	0
CEU	0	0	0	2	49	12	3	0
CHB	0	0	0	7	50	18	3	0
CHS	0	0	0	17	51	21	2	0
CLM	0	0	0	3	34	8	4	0
FIN	0	0	0	0	39	13	5	1
GBR	0	0	0	4	38	9	1	0
IBS	0	0	0	0	4	2	0	0
JPT	0	0	1	12	40	15	1	0
LWK	0	0	1	7	28	25	7	0
MXL	0	0	1	12	32	6	1	0
PUR	0	0	0	11	34	7	0	0
TSI	0	0	0	4	59	15	4	1
YRI	0	0	0	6	27	26	8	2

AFR	0	0	1	13	55	51	15	2
AFR+	0	0	2	16	75	70	17	2
AMR	0	0	1	26	100	21	5	0
ASN	0	0	1	36	141	54	6	0
EUR	0	0	0	10	189	51	13	2

ALL	0	0	4	88	505	196	41	4
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI