Variant CNV_M2_HG19_5_175628183_175728978_5_177047795_177137738

Location: chr5:175628183-175728978 (100Kb), chr5:177047795-177137738 (89Kb), distance: 1.3Mb
Site classification: Duplication
Variant DCN frequency: 0.001

Genes Overlapped
FAM153A EXON protein FAM153A
SIMC1 CDS SUMO-interacting motif-containing protein 1


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	45	0	0
CEU	0	0	0	0	66	0	0
CHB	0	0	0	0	77	0	1
CHS	0	0	0	0	91	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	62	0	0
GBR	0	0	0	0	54	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	0	0	69	0	0
MXL	0	0	0	0	54	0	0
PUR	0	0	0	0	52	0	0
TSI	0	0	0	0	83	0	0
YRI	0	0	0	0	71	0	0

AFR	0	0	0	0	140	0	0
AFR+	0	0	0	0	185	0	0
AMR	0	0	0	0	155	0	0
ASN	0	0	0	0	237	0	1
EUR	0	0	0	0	271	0	0

ALL	0	0	0	0	848	0	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	45	0	0
CEU	0	0	0	0	66	0	0
CHB	0	0	0	0	77	0	1
CHS	0	0	0	0	91	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	62	0	0
GBR	0	0	0	0	54	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	0	0	69	0	0
MXL	0	0	0	0	54	0	0
PUR	0	0	0	0	52	0	0
TSI	0	0	0	0	83	0	0
YRI	0	0	0	0	71	0	0

AFR	0	0	0	0	140	0	0
AFR+	0	0	0	0	185	0	0
AMR	0	0	0	0	155	0	0
ASN	0	0	0	0	237	0	1
EUR	0	0	0	0	271	0	0

ALL	0	0	0	0	848	0	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI