Variant CNV_M2_HG19_2_87351819_87390046_2_88000001_88038538

Location: chr2:87351819-87390046 (38Kb), chr2:88000001-88038538 (38Kb), distance: 609Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.028
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	45	0	0
CEU	0	0	0	1	59	5	1
CHB	0	0	0	1	75	2	0
CHS	0	0	0	0	89	2	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	58	4	0
GBR	0	0	0	0	50	4	0
IBS	0	0	0	1	5	0	0
JPT	0	0	0	0	66	2	1
LWK	0	0	0	5	64	0	0
MXL	0	0	0	0	53	1	0
PUR	0	0	0	0	51	1	0
TSI	0	0	0	1	78	4	0
YRI	0	0	0	1	70	0	0

AFR	0	0	0	6	134	0	0
AFR+	0	0	0	6	179	0	0
AMR	0	0	0	0	153	2	0
ASN	0	0	0	1	230	6	1
EUR	0	0	0	3	250	17	1

ALL	0	0	0	10	812	25	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	45	0	0
CEU	0	0	0	1	58	4	1
CHB	0	0	0	1	72	1	0
CHS	0	0	0	0	87	1	0
CLM	0	0	0	0	48	0	0
FIN	0	0	0	0	55	1	0
GBR	0	0	0	0	50	2	0
IBS	0	0	0	0	5	0	0
JPT	0	0	0	0	64	2	1
LWK	0	0	0	4	58	0	0
MXL	0	0	0	0	52	1	0
PUR	0	0	0	0	49	0	0
TSI	0	0	0	0	77	2	0
YRI	0	0	0	1	70	0	0

AFR	0	0	0	5	128	0	0
AFR+	0	0	0	5	173	0	0
AMR	0	0	0	0	149	1	0
ASN	0	0	0	1	223	4	1
EUR	0	0	0	1	245	9	1

ALL	0	0	0	7	790	14	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI