Variant CNV_M2_HG19_2_110494432_110852754_2_111033788_111392192
Location: chr2:110494432-110852754 (358Kb), chr2:111033788-111392192 (358Kb), distance: 181Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.006
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.006
Genes Overlapped
| LIMS1 | GENE | LIM and senescent cell antigen-like domains 1 |
| LIMS3 | GENE | NA |
| LIMS3L | GENE | NA |
| MALL | CDS | mal, T-cell differentiation protein-like |
| RGPD5 | GENE | RANBP2-like and GRIP domain-containing protein 5/6 isoform 1 |
| RGPD6 | GENE | RANBP2-like and GRIP domain-containing protein 5/6 isoform 1 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5
ASW 0 0 0 0 45 0
CEU 0 0 0 0 65 1
CHB 0 0 0 1 77 0
CHS 0 0 0 0 91 0
CLM 0 0 0 0 48 1
FIN 0 0 0 0 61 1
GBR 0 0 0 0 53 1
IBS 0 0 0 0 6 0
JPT 0 0 0 0 68 1
LWK 0 0 0 0 69 0
MXL 0 0 0 0 53 1
PUR 0 0 0 0 52 0
TSI 0 0 0 0 82 1
YRI 0 0 0 0 71 0
AFR 0 0 0 0 140 0
AFR+ 0 0 0 0 185 0
AMR 0 0 0 0 153 2
ASN 0 0 0 1 236 1
EUR 0 0 0 0 267 4
ALL 0 0 0 1 841 7
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5
ASW 0 0 0 0 45 0
CEU 0 0 0 0 65 0
CHB 0 0 0 1 77 0
CHS 0 0 0 0 91 0
CLM 0 0 0 0 48 1
FIN 0 0 0 0 61 0
GBR 0 0 0 0 52 0
IBS 0 0 0 0 6 0
JPT 0 0 0 0 68 1
LWK 0 0 0 0 69 0
MXL 0 0 0 0 53 1
PUR 0 0 0 0 52 0
TSI 0 0 0 0 82 1
YRI 0 0 0 0 71 0
AFR 0 0 0 0 140 0
AFR+ 0 0 0 0 185 0
AMR 0 0 0 0 153 2
ASN 0 0 0 1 236 1
EUR 0 0 0 0 266 1
ALL 0 0 0 1 840 4
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI