Variant CNV_M2_HG19_22_18712538_18878770_22_21515447_21679525
Location: chr22:18712538-18878770 (166Kb), chr22:21515447-21679525 (164Kb), distance: 2.6Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.698
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.698
Genes Overlapped
AC008132.1 | GENE | NA |
AC008132.13 | GENE | NA |
GGT2 | GENE | gamma-glutamyl transpeptidase 2 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 CN10 CN11 CN12 CN13 CN14 CN15 ASW 0 0 0 0 1 5 5 13 6 5 5 4 1 0 0 0 CEU 0 0 0 0 1 3 12 22 5 11 9 1 1 1 0 0 CHB 0 0 0 0 4 11 29 18 10 3 3 0 0 0 0 0 CHS 0 0 0 1 3 14 33 23 9 6 2 0 0 0 0 0 CLM 0 0 0 0 1 4 13 12 5 6 3 1 1 2 0 1 FIN 0 0 0 0 1 7 14 11 12 7 6 2 1 1 0 0 GBR 0 0 0 0 4 6 12 11 14 5 0 1 1 0 0 0 IBS 0 0 0 0 0 1 0 1 1 0 2 0 0 0 1 0 JPT 0 0 0 0 1 14 25 24 4 1 0 0 0 0 0 0 LWK 0 0 0 0 0 0 9 20 11 14 7 4 3 0 1 0 MXL 0 0 0 0 0 13 14 18 4 3 1 0 1 0 0 0 PUR 0 0 0 0 0 5 13 19 2 6 3 1 1 2 0 0 TSI 0 0 0 0 4 6 12 14 10 13 9 4 5 1 4 1 YRI 0 0 0 0 0 6 7 19 9 11 7 4 6 1 1 0 AFR 0 0 0 0 0 6 16 39 20 25 14 8 9 1 2 0 AFR+ 0 0 0 0 1 11 21 52 26 30 19 12 10 1 2 0 AMR 0 0 0 0 1 22 40 49 11 15 7 2 3 4 0 1 ASN 0 0 0 1 8 39 87 65 23 10 5 0 0 0 0 0 EUR 0 0 0 0 10 23 50 59 42 36 26 8 8 3 5 1 ALL 0 0 0 1 20 95 198 225 102 91 57 22 21 8 7 2
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 CN10 CN11 CN12 CN13 CN14 CN15 ASW 0 0 0 0 1 5 3 5 3 0 1 2 1 0 0 0 CEU 0 0 0 0 1 3 12 21 3 5 4 0 1 1 0 0 CHB 0 0 0 0 4 10 23 17 6 1 2 0 0 0 0 0 CHS 0 0 0 1 2 14 28 14 4 3 1 0 0 0 0 0 CLM 0 0 0 0 1 4 11 8 2 3 1 1 0 0 0 1 FIN 0 0 0 0 1 4 11 7 5 1 3 0 1 0 0 0 GBR 0 0 0 0 3 2 9 8 4 3 0 0 0 0 0 0 IBS 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 JPT 0 0 0 0 1 13 22 21 2 0 0 0 0 0 0 0 LWK 0 0 0 0 0 0 4 16 3 4 1 1 1 0 0 0 MXL 0 0 0 0 0 10 12 11 1 2 0 0 1 0 0 0 PUR 0 0 0 0 0 4 12 18 1 4 1 0 0 0 0 0 TSI 0 0 0 0 3 5 10 11 9 8 4 1 3 0 2 1 YRI 0 0 0 0 0 5 5 17 7 11 6 2 2 1 1 0 AFR 0 0 0 0 0 5 9 33 10 15 7 3 3 1 1 0 AFR+ 0 0 0 0 1 10 12 38 13 15 8 5 4 1 1 0 AMR 0 0 0 0 1 18 35 37 4 9 2 1 1 0 0 1 ASN 0 0 0 1 7 37 73 52 12 4 3 0 0 0 0 0 EUR 0 0 0 0 8 15 42 48 21 17 12 1 5 1 2 1 ALL 0 0 0 1 17 80 162 175 50 45 25 7 10 2 3 2
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI