Variant CNV_M2_HG19_22_18712538_18878770_22_21515447_21679525

Location: chr22:18712538-18878770 (166Kb), chr22:21515447-21679525 (164Kb), distance: 2.6Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.698

Genes Overlapped
AC008132.1 GENE NA
AC008132.13 GENE NA
GGT2 GENE gamma-glutamyl transpeptidase 2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9	CN10	CN11	CN12	CN13	CN14	CN15
ASW	0	0	0	0	1	5	5	13	6	5	5	4	1	0	0	0
CEU	0	0	0	0	1	3	12	22	5	11	9	1	1	1	0	0
CHB	0	0	0	0	4	11	29	18	10	3	3	0	0	0	0	0
CHS	0	0	0	1	3	14	33	23	9	6	2	0	0	0	0	0
CLM	0	0	0	0	1	4	13	12	5	6	3	1	1	2	0	1
FIN	0	0	0	0	1	7	14	11	12	7	6	2	1	1	0	0
GBR	0	0	0	0	4	6	12	11	14	5	0	1	1	0	0	0
IBS	0	0	0	0	0	1	0	1	1	0	2	0	0	0	1	0
JPT	0	0	0	0	1	14	25	24	4	1	0	0	0	0	0	0
LWK	0	0	0	0	0	0	9	20	11	14	7	4	3	0	1	0
MXL	0	0	0	0	0	13	14	18	4	3	1	0	1	0	0	0
PUR	0	0	0	0	0	5	13	19	2	6	3	1	1	2	0	0
TSI	0	0	0	0	4	6	12	14	10	13	9	4	5	1	4	1
YRI	0	0	0	0	0	6	7	19	9	11	7	4	6	1	1	0

AFR	0	0	0	0	0	6	16	39	20	25	14	8	9	1	2	0
AFR+	0	0	0	0	1	11	21	52	26	30	19	12	10	1	2	0
AMR	0	0	0	0	1	22	40	49	11	15	7	2	3	4	0	1
ASN	0	0	0	1	8	39	87	65	23	10	5	0	0	0	0	0
EUR	0	0	0	0	10	23	50	59	42	36	26	8	8	3	5	1

ALL	0	0	0	1	20	95	198	225	102	91	57	22	21	8	7	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9	CN10	CN11	CN12	CN13	CN14	CN15
ASW	0	0	0	0	1	5	3	5	3	0	1	2	1	0	0	0
CEU	0	0	0	0	1	3	12	21	3	5	4	0	1	1	0	0
CHB	0	0	0	0	4	10	23	17	6	1	2	0	0	0	0	0
CHS	0	0	0	1	2	14	28	14	4	3	1	0	0	0	0	0
CLM	0	0	0	0	1	4	11	8	2	3	1	1	0	0	0	1
FIN	0	0	0	0	1	4	11	7	5	1	3	0	1	0	0	0
GBR	0	0	0	0	3	2	9	8	4	3	0	0	0	0	0	0
IBS	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0
JPT	0	0	0	0	1	13	22	21	2	0	0	0	0	0	0	0
LWK	0	0	0	0	0	0	4	16	3	4	1	1	1	0	0	0
MXL	0	0	0	0	0	10	12	11	1	2	0	0	1	0	0	0
PUR	0	0	0	0	0	4	12	18	1	4	1	0	0	0	0	0
TSI	0	0	0	0	3	5	10	11	9	8	4	1	3	0	2	1
YRI	0	0	0	0	0	5	5	17	7	11	6	2	2	1	1	0

AFR	0	0	0	0	0	5	9	33	10	15	7	3	3	1	1	0
AFR+	0	0	0	0	1	10	12	38	13	15	8	5	4	1	1	0
AMR	0	0	0	0	1	18	35	37	4	9	2	1	1	0	0	1
ASN	0	0	0	1	7	37	73	52	12	4	3	0	0	0	0	0
EUR	0	0	0	0	8	15	42	48	21	17	12	1	5	1	2	1

ALL	0	0	0	1	17	80	162	175	50	45	25	7	10	2	3	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI