Variant CNV_M2_HG19_1_248584240_248623089_1_248795556_248834181

Location: chr1:248584240-248623089 (38Kb), chr1:248795556-248834181 (38Kb), distance: 172Kb
Site classification: Duplication
Variant DCN frequency: 0.002

Genes Overlapped
OR2T2 GENE olfactory receptor 2T2
OR2T27 GENE olfactory receptor 2T27
OR2T35 GENE olfactory receptor 2T35


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	0	45	0
CEU	0	0	0	0	66	0
CHB	0	0	0	0	77	1
CHS	0	0	0	0	91	0
CLM	0	0	0	0	49	0
FIN	0	0	0	0	60	2
GBR	0	0	0	0	54	0
IBS	0	0	0	0	6	0
JPT	0	0	0	0	69	0
LWK	0	0	0	0	65	4
MXL	0	0	0	0	54	0
PUR	0	0	0	0	52	0
TSI	0	0	0	0	83	0
YRI	0	0	0	0	71	0

AFR	0	0	0	0	136	4
AFR+	0	0	0	0	181	4
AMR	0	0	0	0	155	0
ASN	0	0	0	0	237	1
EUR	0	0	0	0	269	2

ALL	0	0	0	0	842	7
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	0	45	0
CEU	0	0	0	0	66	0
CHB	0	0	0	0	77	0
CHS	0	0	0	0	91	0
CLM	0	0	0	0	49	0
FIN	0	0	0	0	58	0
GBR	0	0	0	0	54	0
IBS	0	0	0	0	6	0
JPT	0	0	0	0	66	0
LWK	0	0	0	0	60	2
MXL	0	0	0	0	54	0
PUR	0	0	0	0	52	0
TSI	0	0	0	0	77	0
YRI	0	0	0	0	69	0

AFR	0	0	0	0	129	2
AFR+	0	0	0	0	174	2
AMR	0	0	0	0	155	0
ASN	0	0	0	0	234	0
EUR	0	0	0	0	261	0

ALL	0	0	0	0	824	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI