Variant CNV_M2_HG19_1_17088430_17125658_1_234919134_234956347
Location: chr1:17088430-17125658 (37Kb), chr1:234919134-234956347 (37Kb), distance: 217Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.683
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.683
Genes Overlapped
| CROCC | INTRON | rootletin |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 CN10
ASW 0 0 0 1 9 10 12 10 1 2 0
CEU 0 0 0 0 0 9 16 29 12 0 0
CHB 0 0 0 0 0 4 18 31 14 8 3
CHS 0 0 0 0 0 7 19 38 18 8 1
CLM 0 0 0 0 0 4 14 21 9 0 1
FIN 0 0 0 0 0 7 23 16 13 2 1
GBR 0 0 0 0 1 5 18 16 12 2 0
IBS 0 0 0 0 0 1 0 5 0 0 0
JPT 0 0 0 0 1 2 14 25 19 7 1
LWK 0 0 0 0 9 18 27 11 3 1 0
MXL 0 0 0 0 0 6 16 26 6 0 0
PUR 0 0 0 0 1 22 15 10 4 0 0
TSI 0 0 0 0 1 11 23 26 17 4 1
YRI 0 0 0 3 10 25 22 7 4 0 0
AFR 0 0 0 3 19 43 49 18 7 1 0
AFR+ 0 0 0 4 28 53 61 28 8 3 0
AMR 0 0 0 0 1 32 45 57 19 0 1
ASN 0 0 0 0 1 13 51 94 51 23 5
EUR 0 0 0 0 2 33 80 92 54 8 2
ALL 0 0 0 4 32 131 237 271 132 34 8
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 CN10
ASW 0 0 0 1 9 9 10 9 0 1 0
CEU 0 0 0 0 0 7 15 26 9 0 0
CHB 0 0 0 0 0 4 15 30 10 5 2
CHS 0 0 0 0 0 5 12 17 9 0 0
CLM 0 0 0 0 0 3 11 17 2 0 1
FIN 0 0 0 0 0 3 17 9 8 1 0
GBR 0 0 0 0 0 3 12 10 8 2 0
IBS 0 0 0 0 0 1 0 4 0 0 0
JPT 0 0 0 0 1 2 11 20 18 4 1
LWK 0 0 0 0 5 13 21 4 3 0 0
MXL 0 0 0 0 0 6 15 21 5 0 0
PUR 0 0 0 0 0 13 8 5 2 0 0
TSI 0 0 0 0 1 11 22 24 16 3 1
YRI 0 0 0 3 9 24 20 7 4 0 0
AFR 0 0 0 3 14 37 41 11 7 0 0
AFR+ 0 0 0 4 23 46 51 20 7 1 0
AMR 0 0 0 0 0 22 34 43 9 0 1
ASN 0 0 0 0 1 11 38 67 37 9 3
EUR 0 0 0 0 1 25 66 73 41 6 1
ALL 0 0 0 4 25 104 189 203 94 16 5
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI