Variant CNV_M2_HG19_1_161479598_161518642_1_161560922_161599999

Location: chr1:161479598-161518642 (39Kb), chr1:161560922-161599999 (39Kb), distance: 42Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.268

Genes Overlapped
FCGR2A CDS low affinity immunoglobulin gamma Fc region receptor II-a precursor
FCGR2B INTRON low affinity immunoglobulin gamma Fc region receptor II-b isoform 2 precursor
FCGR3A CDS low affinity immunoglobulin gamma Fc region receptor III-A precursor
FCGR3A INTRON low affinity immunoglobulin gamma Fc region receptor III-A precursor
FCGR3B CDS low affinity immunoglobulin gamma Fc region receptor III-B isoform 1
HSPA6 GENE heat shock 70 kDa protein 6


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	1	4	33	6	0	1
CEU	0	0	1	4	51	8	2	0
CHB	0	0	1	10	46	18	2	1
CHS	0	0	1	3	65	20	2	0
CLM	0	0	1	8	30	10	0	0
FIN	0	0	1	4	52	5	0	0
GBR	0	0	0	8	42	4	0	0
IBS	0	0	1	0	5	0	0	0
JPT	0	0	0	4	49	15	1	0
LWK	0	0	0	9	48	12	0	0
MXL	0	0	0	3	35	13	3	0
PUR	0	0	0	10	41	1	0	0
TSI	0	0	0	6	69	7	0	1
YRI	0	0	1	16	49	5	0	0

AFR	0	0	1	25	97	17	0	0
AFR+	0	0	2	29	130	23	0	1
AMR	0	0	1	21	106	24	3	0
ASN	0	0	2	17	160	53	5	1
EUR	0	0	3	22	219	24	2	1

ALL	0	0	8	89	615	124	10	3
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	1	4	31	4	0	1
CEU	0	0	1	4	50	7	2	0
CHB	0	0	1	10	44	18	2	1
CHS	0	0	1	3	60	18	2	0
CLM	0	0	1	6	28	8	0	0
FIN	0	0	1	4	48	5	0	0
GBR	0	0	0	8	34	3	0	0
IBS	0	0	1	0	4	0	0	0
JPT	0	0	0	3	47	15	1	0
LWK	0	0	0	7	44	7	0	0
MXL	0	0	0	3	33	11	2	0
PUR	0	0	0	8	32	1	0	0
TSI	0	0	0	6	68	6	0	0
YRI	0	0	1	16	49	5	0	0

AFR	0	0	1	23	93	12	0	0
AFR+	0	0	2	27	124	16	0	1
AMR	0	0	1	17	93	20	2	0
ASN	0	0	2	16	151	51	5	1
EUR	0	0	3	22	204	21	2	0

ALL	0	0	8	82	572	108	9	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI