Variant CNV_M2_HG19_1_1567837_1584471_1_1631056_1647700

Location: chr1:1567837-1584471 (16Kb), chr1:1631056-1647700 (16Kb), distance: 46Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.092

Genes Overlapped
CDK11A CDS cyclin-dependent kinase 11A isoform 4
CDK11B CDS cyclin-dependent kinase 11B isoform 9
MMP23B CDS matrix metalloproteinase-23


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	2	42	1	0
CEU	0	0	0	6	57	3	0
CHB	0	0	0	8	66	2	2
CHS	0	0	0	12	76	3	0
CLM	0	0	0	4	43	2	0
FIN	0	0	0	8	53	1	0
GBR	0	0	0	5	45	4	0
IBS	0	0	0	0	5	1	0
JPT	0	0	0	3	66	0	0
LWK	0	0	0	4	65	0	0
MXL	0	0	0	3	50	1	0
PUR	0	0	0	15	34	3	0
TSI	0	0	0	9	70	4	0
YRI	0	0	0	4	66	1	0

AFR	0	0	0	8	131	1	0
AFR+	0	0	0	10	173	2	0
AMR	0	0	0	22	127	6	0
ASN	0	0	0	23	208	5	2
EUR	0	0	0	28	230	13	0

ALL	0	0	0	83	738	26	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	2	41	1	0
CEU	0	0	0	4	55	3	0
CHB	0	0	0	7	62	2	1
CHS	0	0	0	5	70	0	0
CLM	0	0	0	3	38	0	0
FIN	0	0	0	3	48	0	0
GBR	0	0	0	3	36	2	0
IBS	0	0	0	0	4	0	0
JPT	0	0	0	2	66	0	0
LWK	0	0	0	3	56	0	0
MXL	0	0	0	3	49	0	0
PUR	0	0	0	7	26	2	0
TSI	0	0	0	8	70	4	0
YRI	0	0	0	3	64	1	0

AFR	0	0	0	6	120	1	0
AFR+	0	0	0	8	161	2	0
AMR	0	0	0	13	113	2	0
ASN	0	0	0	14	198	2	1
EUR	0	0	0	18	213	9	0

ALL	0	0	0	53	685	15	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI