Variant CNV_M2_HG19_1_143880004_143906232_1_149433402_149459645

Location: chr1:143880004-143906232 (26Kb), chr1:149433402-149459645 (26Kb), distance: 5.5Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.077

Genes Overlapped
FAM72C GENE NA
FAM72D CDS protein FAM72D


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	2	41	2
CEU	0	0	0	14	52	0
CHB	0	0	0	14	63	1
CHS	0	0	0	11	80	0
CLM	0	0	0	5	44	0
FIN	0	0	0	8	54	0
GBR	0	0	0	9	45	0
IBS	0	0	0	0	6	0
JPT	0	0	0	11	57	1
LWK	0	0	0	7	62	0
MXL	0	0	0	7	46	1
PUR	0	0	0	14	37	1
TSI	0	0	0	18	65	0
YRI	0	0	0	4	66	1

AFR	0	0	0	11	128	1
AFR+	0	0	0	13	169	3
AMR	0	0	0	26	127	2
ASN	0	0	0	36	200	2
EUR	0	0	0	49	222	0

ALL	0	0	0	124	718	7
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	1	41	1
CEU	0	0	0	5	45	0
CHB	0	0	0	8	56	1
CHS	0	0	0	3	64	0
CLM	0	0	0	2	34	0
FIN	0	0	0	0	41	0
GBR	0	0	0	6	43	0
IBS	0	0	0	0	5	0
JPT	0	0	0	5	55	1
LWK	0	0	0	1	57	0
MXL	0	0	0	1	41	0
PUR	0	0	0	3	31	0
TSI	0	0	0	12	55	0
YRI	0	0	0	3	64	0

AFR	0	0	0	4	121	0
AFR+	0	0	0	5	162	1
AMR	0	0	0	6	106	0
ASN	0	0	0	16	175	2
EUR	0	0	0	23	189	0

ALL	0	0	0	50	632	3
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI