Variant CNV_M2_HG19_1_13386378_13553150_1_13607163_13774009

Location: chr1:13386378-13553150 (166Kb), chr1:13607163-13774009 (166Kb), distance: 54Kb
Site classification: Duplication
Variant DCN frequency: 0.002

Genes Overlapped
PRAMEF13 GENE PRAME family member 13
PRAMEF14 GENE NA
PRAMEF15 GENE PRAME family member 9/15
PRAMEF16 GENE PRAME family member 16
PRAMEF17 GENE PRAME family member 17
PRAMEF18 GENE PRAME family member 18
PRAMEF19 GENE PRAME family member 19
PRAMEF20 GENE PRAME family member 20/21
PRAMEF21 GENE PRAME family member 20/21
PRAMEF8 GENE PRAME family member 8
PRAMEF9 GENE PRAME family member 9/15


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	65	1
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	82	1
YRI	0	0	70	1

AFR	0	0	139	1
AFR+	0	0	184	1
AMR	0	0	155	0
ASN	0	0	238	0
EUR	0	0	269	2

ALL	0	0	846	3
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	0	0	45	0
CEU	0	0	65	1
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	0	49	0
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	0	69	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	82	1
YRI	0	0	69	0

AFR	0	0	138	0
AFR+	0	0	183	0
AMR	0	0	155	0
ASN	0	0	238	0
EUR	0	0	269	2

ALL	0	0	845	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI