Variant CNV_M2_HG19_1_13142562_13171720_1_13189995_13219127

Location: chr1:13142562-13171720 (29Kb), chr1:13189995-13219127 (29Kb), distance: 18Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.043

Genes Overlapped
WI2-2994D6.2 CDS NA


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	2	1	41	1	0
CEU	0	0	1	2	63	0	0
CHB	0	0	0	0	78	0	0
CHS	0	0	2	2	87	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	61	1	0
GBR	0	0	0	2	52	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	69	0	0
LWK	0	0	5	4	58	0	2
MXL	0	0	0	0	54	0	0
PUR	0	0	1	0	51	0	0
TSI	0	0	0	3	79	1	0
YRI	0	0	7	1	63	0	0

AFR	0	0	12	5	121	0	2
AFR+	0	0	14	6	162	1	2
AMR	0	0	1	0	154	0	0
ASN	0	0	2	2	234	0	0
EUR	0	0	1	7	261	2	0

ALL	0	0	18	15	811	3	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	2	1	41	1	0
CEU	0	0	1	2	63	0	0
CHB	0	0	0	0	78	0	0
CHS	0	0	2	2	87	0	0
CLM	0	0	0	0	49	0	0
FIN	0	0	0	0	60	0	0
GBR	0	0	0	2	52	0	0
IBS	0	0	0	0	6	0	0
JPT	0	0	0	0	68	0	0
LWK	0	0	5	3	58	0	2
MXL	0	0	0	0	54	0	0
PUR	0	0	1	0	51	0	0
TSI	0	0	0	3	79	1	0
YRI	0	0	7	1	63	0	0

AFR	0	0	12	4	121	0	2
AFR+	0	0	14	5	162	1	2
AMR	0	0	1	0	154	0	0
ASN	0	0	2	2	233	0	0
EUR	0	0	1	7	260	1	0

ALL	0	0	18	14	809	2	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI