Variant CNV_M2_HG19_1_121086699_121133098_1_206536833_206583337
Location: chr1:121086699-121133098 (46Kb), chr1:206536833-206583337 (46Kb), distance: 85Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.169
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.169
Genes Overlapped
SRGAP2 | CDS | SLIT-ROBO Rho GTPase-activating protein 2 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 ASW 0 0 0 0 0 0 0 2 40 3 CEU 0 0 0 0 0 0 1 16 49 0 CHB 0 0 0 0 0 0 0 19 57 2 CHS 0 0 0 0 0 0 0 16 70 5 CLM 0 0 0 0 0 0 0 9 38 2 FIN 0 0 0 0 0 0 0 13 46 3 GBR 0 0 0 0 0 0 0 6 45 3 IBS 0 0 0 0 0 0 0 0 6 0 JPT 0 0 0 0 0 0 0 16 51 2 LWK 0 0 0 0 0 0 0 7 62 0 MXL 0 0 0 0 0 0 1 7 43 3 PUR 0 0 0 0 0 0 0 15 37 0 TSI 0 0 0 0 0 0 1 18 63 1 YRI 0 0 0 0 0 0 1 6 63 1 AFR 0 0 0 0 0 0 1 13 125 1 AFR+ 0 0 0 0 0 0 1 15 165 4 AMR 0 0 0 0 0 0 1 31 118 5 ASN 0 0 0 0 0 0 0 51 178 9 EUR 0 0 0 0 0 0 2 53 209 7 ALL 0 0 0 0 0 0 4 150 670 25
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8 CN9 ASW 0 0 0 0 0 0 0 1 37 3 CEU 0 0 0 0 0 0 1 14 40 0 CHB 0 0 0 0 0 0 0 18 55 1 CHS 0 0 0 0 0 0 0 4 60 2 CLM 0 0 0 0 0 0 0 5 35 0 FIN 0 0 0 0 0 0 0 6 36 3 GBR 0 0 0 0 0 0 0 2 32 1 IBS 0 0 0 0 0 0 0 0 6 0 JPT 0 0 0 0 0 0 0 12 51 1 LWK 0 0 0 0 0 0 0 3 58 0 MXL 0 0 0 0 0 0 0 6 39 2 PUR 0 0 0 0 0 0 0 10 33 0 TSI 0 0 0 0 0 0 1 17 52 1 YRI 0 0 0 0 0 0 1 5 60 1 AFR 0 0 0 0 0 0 1 8 118 1 AFR+ 0 0 0 0 0 0 1 9 155 4 AMR 0 0 0 0 0 0 0 21 107 2 ASN 0 0 0 0 0 0 0 34 166 4 EUR 0 0 0 0 0 0 2 39 166 5 ALL 0 0 0 0 0 0 3 103 594 15
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI