Variant CNV_M2_HG19_19_41336557_41361522_19_41367421_41393307

Location: chr19:41336557-41361522 (24Kb), chr19:41367421-41393307 (25Kb), distance: 5.9Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.077

Genes Overlapped
CTC-490E21.12 INTRON NA
CYP2A6 GENE cytochrome P450 2A6 precursor
CYP2A7 GENE cytochrome P450, family 2, subfamily A, polypeptide 7


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	2	43	0
CEU	0	0	0	4	61	1
CHB	0	0	0	13	65	0
CHS	0	0	1	14	76	0
CLM	0	0	0	3	46	0
FIN	0	0	0	1	61	0
GBR	0	0	0	0	54	0
IBS	0	0	0	1	5	0
JPT	0	0	2	21	46	0
LWK	0	0	0	3	65	1
MXL	0	0	1	1	52	0
PUR	0	0	2	12	38	0
TSI	0	0	0	2	79	2
YRI	0	0	0	5	64	2

AFR	0	0	0	8	129	3
AFR+	0	0	0	10	172	3
AMR	0	0	3	16	136	0
ASN	0	0	3	48	187	0
EUR	0	0	0	8	260	3

ALL	0	0	6	82	755	6
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	1	39	0
CEU	0	0	0	4	60	1
CHB	0	0	0	6	62	0
CHS	0	0	1	5	68	0
CLM	0	0	0	2	42	0
FIN	0	0	0	1	57	0
GBR	0	0	0	0	50	0
IBS	0	0	0	1	5	0
JPT	0	0	2	16	43	0
LWK	0	0	0	2	59	0
MXL	0	0	1	1	49	0
PUR	0	0	0	5	25	0
TSI	0	0	0	1	78	2
YRI	0	0	0	4	62	2

AFR	0	0	0	6	121	2
AFR+	0	0	0	7	160	2
AMR	0	0	1	8	116	0
ASN	0	0	3	27	173	0
EUR	0	0	0	7	250	3

ALL	0	0	4	49	699	5
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI