Variant CNV_M2_HG19_17_43593498_43631279_17_45090987_45129812

Location: chr17:43593498-43631279 (37Kb), chr17:45090987-45129812 (38Kb), distance: 1.5Mb
Site classification: Duplication
Variant DCN frequency: 0.062

Genes Overlapped
GOSR2 CDS Golgi SNAP receptor complex member 2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	1	7	37	0
CEU	0	0	1	11	54	0
CHB	0	0	0	0	78	0
CHS	0	0	0	0	91	0
CLM	0	0	1	12	36	0
FIN	0	0	3	7	52	0
GBR	0	0	2	13	39	0
IBS	0	0	1	0	5	0
JPT	0	0	0	1	68	0
LWK	0	0	0	2	67	0
MXL	0	0	3	10	41	0
PUR	0	0	3	16	33	0
TSI	0	0	5	27	51	0
YRI	0	0	0	0	70	1

AFR	0	0	0	2	137	1
AFR+	0	0	1	9	174	1
AMR	0	0	7	38	110	0
ASN	0	0	0	1	237	0
EUR	0	0	12	58	201	0

ALL	0	0	20	106	722	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	0	0	6	35
CEU	0	0	0	4	44
CHB	0	0	0	0	76
CHS	0	0	0	0	80
CLM	0	0	0	3	32
FIN	0	0	2	0	45
GBR	0	0	0	2	27
IBS	0	0	0	0	4
JPT	0	0	0	1	64
LWK	0	0	0	0	60
MXL	0	0	1	4	36
PUR	0	0	1	8	26
TSI	0	0	1	9	35
YRI	0	0	0	0	70

AFR	0	0	0	0	130
AFR+	0	0	0	6	165
AMR	0	0	2	15	94
ASN	0	0	0	1	220
EUR	0	0	3	15	155

ALL	0	0	5	37	634
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI