Variant CNV_M2_HG19_16_70845287_71202573_GL000192.1_48724_413559

Location: chr16:70845287-71202573 (357Kb), chrGL000192.1:48724-413559 (364Kb), distance: NA
Site classification: Multi-allelic
Variant DCN frequency: 0.004

Genes Overlapped
HYDIN CDS hydrocephalus-inducing protein homolog isoform a


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	0	43	2
CEU	0	0	0	0	66	0
CHB	0	0	0	0	78	0
CHS	0	0	0	0	91	0
CLM	0	0	0	0	49	0
FIN	0	0	0	0	62	0
GBR	0	0	0	0	54	0
IBS	0	0	0	0	6	0
JPT	0	0	0	0	69	0
LWK	0	0	0	0	69	0
MXL	0	0	0	0	54	0
PUR	0	0	0	0	52	0
TSI	0	0	0	0	83	0
YRI	0	0	0	1	70	0

AFR	0	0	0	1	139	0
AFR+	0	0	0	1	182	2
AMR	0	0	0	0	155	0
ASN	0	0	0	0	238	0
EUR	0	0	0	0	271	0

ALL	0	0	0	1	846	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5
ASW	0	0	0	0	43	2
CEU	0	0	0	0	66	0
CHB	0	0	0	0	78	0
CHS	0	0	0	0	91	0
CLM	0	0	0	0	49	0
FIN	0	0	0	0	62	0
GBR	0	0	0	0	54	0
IBS	0	0	0	0	6	0
JPT	0	0	0	0	69	0
LWK	0	0	0	0	69	0
MXL	0	0	0	0	54	0
PUR	0	0	0	0	52	0
TSI	0	0	0	0	83	0
YRI	0	0	0	1	70	0

AFR	0	0	0	1	139	0
AFR+	0	0	0	1	182	2
AMR	0	0	0	0	155	0
ASN	0	0	0	0	238	0
EUR	0	0	0	0	271	0

ALL	0	0	0	1	846	2
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI