Variant CNV_M2_HG19_16_2649225_2661356_16_2727678_2741054

Location: chr16:2649225-2661356 (12Kb), chr16:2727678-2741054 (13Kb), distance: 66Kb
Site classification: Duplication
Variant DCN frequency: 0.008

Genes Overlapped
KCTD5 CDS BTB/POZ domain-containing protein KCTD5
PDPK1 EXON 3-phosphoinositide-dependent protein kinase 1 isoform 3


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	44	1	0
CEU	0	0	0	0	66	0	0
CHB	0	0	0	0	74	4	0
CHS	0	0	0	0	88	3	0
CLM	0	0	0	0	46	2	1
FIN	0	0	0	0	59	2	1
GBR	0	0	0	0	50	4	0
IBS	0	0	0	0	5	0	1
JPT	0	0	0	0	69	0	0
LWK	0	0	0	0	69	0	0
MXL	0	0	0	0	54	0	0
PUR	0	0	0	0	49	2	1
TSI	0	0	0	0	82	1	0
YRI	0	0	0	0	70	1	0

AFR	0	0	0	0	139	1	0
AFR+	0	0	0	0	183	2	0
AMR	0	0	0	0	149	4	2
ASN	0	0	0	0	231	7	0
EUR	0	0	0	0	262	7	2

ALL	0	0	0	0	825	20	4
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	44	0	0
CEU	0	0	0	0	66	0	0
CHB	0	0	0	0	73	1	0
CHS	0	0	0	0	82	1	0
CLM	0	0	0	0	45	0	1
FIN	0	0	0	0	54	0	0
GBR	0	0	0	0	47	1	0
IBS	0	0	0	0	3	0	0
JPT	0	0	0	0	66	0	0
LWK	0	0	0	0	65	0	0
MXL	0	0	0	0	51	0	0
PUR	0	0	0	0	48	0	0
TSI	0	0	0	0	81	1	0
YRI	0	0	0	0	69	1	0

AFR	0	0	0	0	134	1	0
AFR+	0	0	0	0	178	1	0
AMR	0	0	0	0	144	0	1
ASN	0	0	0	0	221	2	0
EUR	0	0	0	0	251	2	0

ALL	0	0	0	0	794	5	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI