Variant CNV_M2_HG19_16_2584143_2634845_16_2665342_2727514

Location: chr16:2584143-2634845 (50Kb), chr16:2665342-2727514 (62Kb), distance: 30Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.030

Genes Overlapped
PDPK1 CDS 3-phosphoinositide-dependent protein kinase 1 isoform 3


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	44	1	0
CEU	0	0	0	2	64	0	0
CHB	0	0	0	1	75	2	0
CHS	0	0	0	11	76	4	0
CLM	0	0	0	0	46	3	0
FIN	0	0	0	2	57	3	0
GBR	0	0	0	1	49	4	0
IBS	0	0	0	0	5	0	1
JPT	0	0	0	0	68	1	0
LWK	0	0	0	3	66	0	0
MXL	0	0	0	0	54	0	0
PUR	0	0	0	8	41	3	0
TSI	0	0	0	0	82	1	0
YRI	0	0	0	0	70	1	0

AFR	0	0	0	3	136	1	0
AFR+	0	0	0	3	180	2	0
AMR	0	0	0	8	141	6	0
ASN	0	0	0	12	219	7	0
EUR	0	0	0	5	257	8	1

ALL	0	0	0	28	797	23	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	0	0	0	0	44	1	0
CEU	0	0	0	1	62	0	0
CHB	0	0	0	0	71	2	0
CHS	0	0	0	4	74	1	0
CLM	0	0	0	0	44	1	0
FIN	0	0	0	2	53	1	0
GBR	0	0	0	1	47	3	0
IBS	0	0	0	0	5	0	1
JPT	0	0	0	0	67	0	0
LWK	0	0	0	0	63	0	0
MXL	0	0	0	0	54	0	0
PUR	0	0	0	2	33	2	0
TSI	0	0	0	0	81	1	0
YRI	0	0	0	0	70	1	0

AFR	0	0	0	0	133	1	0
AFR+	0	0	0	0	177	2	0
AMR	0	0	0	2	131	3	0
ASN	0	0	0	4	212	3	0
EUR	0	0	0	4	248	5	1

ALL	0	0	0	10	768	13	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI