Variant CNV_M2_HG19_16_15059318_15124767_16_70043802_70109518

Location: chr16:15059318-15124767 (65Kb), chr16:70043802-70109518 (65Kb), distance: 54Mb
Site classification: Multi-allelic
Variant DCN frequency: 0.483

Genes Overlapped
PDXDC1 CDS pyridoxal-dependent decarboxylase domain-containing protein 1
RP11-419C5.2 EXON NA


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	0	0	4	18	23	0
CEU	0	0	0	0	2	17	47	0
CHB	0	0	0	0	34	38	6	0
CHS	0	0	0	0	54	31	6	0
CLM	0	0	0	0	3	19	27	0
FIN	0	0	0	0	9	31	22	0
GBR	0	0	0	0	0	17	37	0
IBS	0	0	0	0	0	0	6	0
JPT	0	0	0	0	28	26	14	1
LWK	0	0	0	0	3	34	32	0
MXL	0	0	0	0	10	27	17	0
PUR	0	0	0	0	7	21	23	1
TSI	0	0	0	0	2	19	62	0
YRI	0	0	0	0	2	29	40	0

AFR	0	0	0	0	5	63	72	0
AFR+	0	0	0	0	9	81	95	0
AMR	0	0	0	0	20	67	67	1
ASN	0	0	0	0	116	95	26	1
EUR	0	0	0	0	13	84	174	0

ALL	0	0	0	0	158	327	362	2
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7
ASW	0	0	0	0	2	3	19	0
CEU	0	0	0	0	1	10	41	0
CHB	0	0	0	0	27	13	5	0
CHS	0	0	0	0	38	13	4	0
CLM	0	0	0	0	0	8	13	0
FIN	0	0	0	0	5	8	9	0
GBR	0	0	0	0	0	7	21	0
IBS	0	0	0	0	0	0	4	0
JPT	0	0	0	0	20	15	10	0
LWK	0	0	0	0	1	11	23	0
MXL	0	0	0	0	4	9	11	0
PUR	0	0	0	0	5	7	13	1
TSI	0	0	0	0	2	13	54	0
YRI	0	0	0	0	2	21	36	0

AFR	0	0	0	0	3	32	59	0
AFR+	0	0	0	0	5	35	78	0
AMR	0	0	0	0	9	24	37	1
ASN	0	0	0	0	85	41	19	0
EUR	0	0	0	0	8	38	129	0

ALL	0	0	0	0	107	138	263	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI