Variant CNV_M2_HG19_16_14781037_14800000_16_14820156_14839122

Location: chr16:14781037-14800000 (18Kb), chr16:14820156-14839122 (18Kb), distance: 20Kb
Site classification: Multi-allelic
Variant DCN frequency: 0.530

Genes Overlapped
PLA2G10 CDS group 10 secretory phospholipase A2 precursor
RP11-719K4.1 EXON NA


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9
ASW	0	0	4	12	19	8	1	0	0	1
CEU	0	0	24	34	7	1	0	0	0	0
CHB	0	0	11	31	29	7	0	0	0	0
CHS	0	0	8	49	27	6	1	0	0	0
CLM	0	0	12	21	14	2	0	0	0	0
FIN	0	0	31	26	4	1	0	0	0	0
GBR	0	0	15	28	11	0	0	0	0	0
IBS	0	0	2	3	1	0	0	0	0	0
JPT	0	0	6	32	23	5	3	0	0	0
LWK	0	0	0	20	33	7	8	1	0	0
MXL	0	0	10	23	16	4	1	0	0	0
PUR	0	0	16	27	9	0	0	0	0	0
TSI	0	0	31	38	13	1	0	0	0	0
YRI	0	0	2	10	24	20	14	1	0	0

AFR	0	0	2	30	57	27	22	2	0	0
AFR+	0	0	6	42	76	35	23	2	0	1
AMR	0	0	38	71	39	6	1	0	0	0
ASN	0	0	25	112	79	18	4	0	0	0
EUR	0	0	103	129	36	3	0	0	0	0

ALL	0	0	172	354	230	62	28	2	0	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6	CN7	CN8	CN9
ASW	0	0	1	9	11	1	1	0	0	1
CEU	0	0	23	27	4	0	0	0	0	0
CHB	0	0	7	23	18	4	0	0	0	0
CHS	0	0	6	29	5	2	1	0	0	0
CLM	0	0	11	17	5	1	0	0	0	0
FIN	0	0	25	20	1	0	0	0	0	0
GBR	0	0	9	20	8	0	0	0	0	0
IBS	0	0	0	2	0	0	0	0	0	0
JPT	0	0	5	30	18	3	1	0	0	0
LWK	0	0	0	10	14	2	1	0	0	0
MXL	0	0	6	16	9	1	0	0	0	0
PUR	0	0	13	21	2	0	0	0	0	0
TSI	0	0	29	37	10	0	0	0	0	0
YRI	0	0	2	9	20	14	9	0	0	0

AFR	0	0	2	19	34	16	10	0	0	0
AFR+	0	0	3	28	45	17	11	0	0	1
AMR	0	0	30	54	16	2	0	0	0	0
ASN	0	0	18	82	41	9	2	0	0	0
EUR	0	0	86	106	23	0	0	0	0	0

ALL	0	0	137	270	125	28	13	0	0	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI