Variant CNV_M2_HG19_12_123178354_123191077_12_123191092_123204503
Location: chr12:123178354-123191077 (12Kb), chr12:123191092-123204503 (13Kb), distance: 14b
Site classification: Duplication
Variant DCN frequency: 0.025
Genes Overlapped
Site classification: Duplication
Variant DCN frequency: 0.025
Genes Overlapped
HCAR1 | EXON | hydroxycarboxylic acid receptor 1 |
HCAR1 | INTRON | hydroxycarboxylic acid receptor 1 |
HCAR2 | GENE | hydroxycarboxylic acid receptor 2 |
HCAR3 | GENE | hydroxycarboxylic acid receptor 3 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5 ASW 0 0 0 0 45 0 CEU 0 0 0 0 63 3 CHB 0 0 0 0 67 11 CHS 0 0 0 0 88 3 CLM 0 0 0 0 49 0 FIN 0 0 0 1 61 0 GBR 0 0 0 0 54 0 IBS 0 0 0 0 6 0 JPT 0 0 0 0 54 15 LWK 0 0 0 0 68 1 MXL 0 0 0 0 54 0 PUR 0 0 0 0 52 0 TSI 0 0 0 0 80 3 YRI 0 0 0 0 70 1 AFR 0 0 0 0 138 2 AFR+ 0 0 0 0 183 2 AMR 0 0 0 0 155 0 ASN 0 0 0 0 209 29 EUR 0 0 0 1 264 6 ALL 0 0 0 1 811 37
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5 ASW 0 0 0 0 39 0 CEU 0 0 0 0 59 0 CHB 0 0 0 0 64 4 CHS 0 0 0 0 75 2 CLM 0 0 0 0 48 0 FIN 0 0 0 0 60 0 GBR 0 0 0 0 52 0 IBS 0 0 0 0 6 0 JPT 0 0 0 0 48 12 LWK 0 0 0 0 64 0 MXL 0 0 0 0 48 0 PUR 0 0 0 0 48 0 TSI 0 0 0 0 76 1 YRI 0 0 0 0 68 0 AFR 0 0 0 0 132 0 AFR+ 0 0 0 0 171 0 AMR 0 0 0 0 144 0 ASN 0 0 0 0 187 18 EUR 0 0 0 0 253 1 ALL 0 0 0 0 755 19
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI