Variant CNV_M2_HG19_12_10569234_10584672_12_10584673_10600097
Location: chr12:10569234-10584672 (15Kb), chr12:10584673-10600097 (15Kb), distance: 0b
Site classification: Multi-allelic
Variant DCN frequency: 0.262
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.262
Genes Overlapped
KLRC1 | CDS | killer cell lectin-like receptor subfamily C, member 1 |
KLRC2 | CDS | NKG2-C type II integral membrane protein |
KLRC3 | CDS | NKG2-E type II integral membrane protein isoform E |
NKG2-E | CDS | NA |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5 ASW 0 0 3 14 28 0 CEU 0 0 0 23 43 0 CHB 0 0 3 20 55 0 CHS 0 0 4 28 56 3 CLM 0 0 1 8 38 2 FIN 0 0 3 18 41 0 GBR 0 0 1 10 43 0 IBS 0 0 0 1 5 0 JPT 0 0 5 16 46 2 LWK 0 0 1 29 39 0 MXL 0 0 1 13 39 1 PUR 0 0 4 11 37 0 TSI 0 0 2 24 57 0 YRI 0 0 1 24 46 0 AFR 0 0 2 53 85 0 AFR+ 0 0 5 67 113 0 AMR 0 0 6 32 114 3 ASN 0 0 12 64 157 5 EUR 0 0 6 76 189 0 ALL 0 0 29 239 573 8
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5 ASW 0 0 1 8 22 0 CEU 0 0 0 17 35 0 CHB 0 0 2 14 49 0 CHS 0 0 3 12 49 1 CLM 0 0 1 4 30 1 FIN 0 0 2 6 31 0 GBR 0 0 1 4 38 0 IBS 0 0 0 1 3 0 JPT 0 0 4 11 38 0 LWK 0 0 1 20 27 0 MXL 0 0 1 9 31 0 PUR 0 0 2 8 27 0 TSI 0 0 1 12 47 0 YRI 0 0 0 20 43 0 AFR 0 0 1 40 70 0 AFR+ 0 0 2 48 92 0 AMR 0 0 4 21 88 1 ASN 0 0 9 37 136 1 EUR 0 0 4 40 154 0 ALL 0 0 19 146 470 2
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI