Variant CNV_M1_HG19_9_44779312_44790593

Location: chr9:44779312-44790593 (11Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.514
Genes overlapped: None


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4
ASW	2	17	26	0	0
CEU	18	30	18	0	0
CHB	3	20	55	0	0
CHS	6	31	53	1	0
CLM	10	24	15	0	0
FIN	14	32	14	1	1
GBR	18	22	14	0	0
IBS	1	2	2	1	0
JPT	0	15	54	0	0
LWK	1	20	47	1	0
MXL	14	28	12	0	0
PUR	12	21	19	0	0
TSI	14	39	28	2	0
YRI	3	18	49	1	0

AFR	4	38	96	2	0
AFR+	6	55	122	2	0
AMR	36	73	46	0	0
ASN	9	66	162	1	0
EUR	65	125	76	4	1

ALL	116	319	406	7	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3
ASW	2	13	26	0
CEU	18	27	18	0
CHB	3	18	55	0
CHS	6	29	51	1
CLM	10	24	14	0
FIN	14	30	13	1
GBR	18	22	14	0
IBS	1	2	2	0
JPT	0	15	53	0
LWK	1	19	45	1
MXL	14	26	11	0
PUR	12	18	19	0
TSI	14	37	28	1
YRI	3	18	47	1

AFR	4	37	92	2
AFR+	6	50	118	2
AMR	36	68	44	0
ASN	9	62	159	1
EUR	65	118	75	2

ALL	116	298	396	5
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI