Variant CNV_M1_HG19_9_43642701_43675607

Location: chr9:43642701-43675607 (32Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.465
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	3	20	21	1	0	0	0
CEU	4	17	38	7	0	0	0
CHB	5	32	37	4	0	0	0
CHS	8	36	40	7	0	0	0
CLM	4	16	26	3	0	0	0
FIN	2	14	32	14	0	0	0
GBR	0	10	36	8	0	0	0
IBS	0	3	3	0	0	0	0
JPT	5	23	39	1	0	0	1
LWK	6	29	33	1	0	0	0
MXL	4	21	27	2	0	0	0
PUR	2	12	36	2	0	0	0
TSI	3	24	50	6	0	0	0
YRI	12	24	35	0	0	0	0

AFR	18	53	68	1	0	0	0
AFR+	21	73	89	2	0	0	0
AMR	10	49	89	7	0	0	0
ASN	18	91	116	12	0	0	1
EUR	9	68	159	35	0	0	0

ALL	58	281	453	56	0	0	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	3	20	21	1	0	0	0
CEU	4	17	38	7	0	0	0
CHB	5	32	37	4	0	0	0
CHS	8	36	40	6	0	0	0
CLM	4	16	26	3	0	0	0
FIN	2	14	32	14	0	0	0
GBR	0	10	36	8	0	0	0
IBS	0	3	3	0	0	0	0
JPT	5	23	39	1	0	0	1
LWK	6	28	33	1	0	0	0
MXL	4	21	27	2	0	0	0
PUR	2	12	36	2	0	0	0
TSI	3	24	50	6	0	0	0
YRI	12	24	35	0	0	0	0

AFR	18	52	68	1	0	0	0
AFR+	21	72	89	2	0	0	0
AMR	10	49	89	7	0	0	0
ASN	18	91	116	11	0	0	1
EUR	9	68	159	35	0	0	0

ALL	58	280	453	55	0	0	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI