Variant CNV_M1_HG19_9_41971692_41985730

Location: chr9:41971692-41985730 (14Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.575
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	5	16	22	2	0	0	0
CEU	12	31	16	5	2	0	0
CHB	30	32	12	4	0	0	0
CHS	22	48	18	3	0	0	0
CLM	7	24	17	1	0	0	0
FIN	14	29	18	1	0	0	0
GBR	11	17	23	3	0	0	0
IBS	4	0	2	0	0	0	0
JPT	27	29	11	2	0	0	0
LWK	7	25	21	16	0	0	0
MXL	13	29	11	1	0	0	0
PUR	7	19	24	2	0	0	0
TSI	16	36	26	5	0	0	0
YRI	2	25	35	8	0	0	1

AFR	9	50	56	24	0	0	1
AFR+	14	66	78	26	0	0	1
AMR	27	72	52	4	0	0	0
ASN	79	109	41	9	0	0	0
EUR	57	113	85	14	2	0	0

ALL	177	360	256	53	2	0	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4	CN5	CN6
ASW	5	16	22	2	0	0	0
CEU	12	31	16	5	1	0	0
CHB	30	31	12	4	0	0	0
CHS	22	48	18	3	0	0	0
CLM	7	23	17	1	0	0	0
FIN	14	28	17	1	0	0	0
GBR	11	17	22	3	0	0	0
IBS	4	0	1	0	0	0	0
JPT	27	29	11	2	0	0	0
LWK	7	25	20	14	0	0	0
MXL	13	28	11	1	0	0	0
PUR	7	19	22	2	0	0	0
TSI	16	36	25	5	0	0	0
YRI	2	24	35	8	0	0	1

AFR	9	49	55	22	0	0	1
AFR+	14	65	77	24	0	0	1
AMR	27	70	50	4	0	0	0
ASN	79	108	41	9	0	0	0
EUR	57	112	81	14	1	0	0

ALL	177	355	249	51	1	0	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI