Variant CNV_M1_HG19_9_28649347_28657875

Location: chr9:28649347-28657875 (8.5Kb)
Site classification: Deletion
Variant DCN frequency: 0.006

Genes Overlapped
LINGO2 INTRON leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 precursor


1000 Genomes Phase 1


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Diploid copy number distribution 
POP	CN0	CN1	CN2
ASW	0	1	44
CEU	0	1	65
CHB	0	0	78
CHS	0	0	91
CLM	0	1	48
FIN	0	2	60
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	0	52
TSI	0	0	83
YRI	0	0	71

AFR	0	0	140
AFR+	0	1	184
AMR	0	1	154
ASN	0	0	238
EUR	0	3	268

ALL	0	5	844
Diploid copy number distribution (95% confident) 
POP	CN0	CN1	CN2
ASW	0	1	44
CEU	0	1	65
CHB	0	0	78
CHS	0	0	91
CLM	0	1	48
FIN	0	2	60
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	0	52
TSI	0	0	83
YRI	0	0	71

AFR	0	0	140
AFR+	0	1	184
AMR	0	1	154
ASN	0	0	238
EUR	0	3	268

ALL	0	5	844

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI