Variant CNV_M1_HG19_9_28453327_28476257

Location: chr9:28453327-28476257 (22Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.007

Genes Overlapped
LINGO2 EXON leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 precursor


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	0	45	0	0
CEU	0	0	66	0	0
CHB	0	0	78	0	0
CHS	0	1	90	0	0
CLM	0	0	48	1	0
FIN	0	0	62	0	0
GBR	0	0	53	1	0
IBS	0	0	6	0	0
JPT	0	0	66	2	1
LWK	0	0	69	0	0
MXL	0	0	54	0	0
PUR	0	0	52	0	0
TSI	0	0	83	0	0
YRI	0	0	71	0	0

AFR	0	0	140	0	0
AFR+	0	0	185	0	0
AMR	0	0	154	1	0
ASN	0	1	234	2	1
EUR	0	0	270	1	0

ALL	0	1	843	4	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2	CN3	CN4
ASW	0	0	45	0	0
CEU	0	0	66	0	0
CHB	0	0	78	0	0
CHS	0	1	90	0	0
CLM	0	0	48	1	0
FIN	0	0	62	0	0
GBR	0	0	53	1	0
IBS	0	0	6	0	0
JPT	0	0	66	2	1
LWK	0	0	69	0	0
MXL	0	0	54	0	0
PUR	0	0	52	0	0
TSI	0	0	83	0	0
YRI	0	0	71	0	0

AFR	0	0	140	0	0
AFR+	0	0	185	0	0
AMR	0	0	154	1	0
ASN	0	1	234	2	1
EUR	0	0	270	1	0

ALL	0	1	843	4	1
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI