Variant CNV_M1_HG19_6_55413322_55417640
Location: chr6:55413322-55417640 (4.3Kb)
Site classification: Deletion
Variant DCN frequency: 0.012
Genes Overlapped
Site classification: Deletion
Variant DCN frequency: 0.012
Genes Overlapped
| HMGCLL1 | INTRON | probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3
ASW 0 3 42 0
CEU 0 0 66 0
CHB 0 0 78 0
CHS 0 0 91 0
CLM 0 1 47 1
FIN 0 0 62 0
GBR 0 0 54 0
IBS 0 0 6 0
JPT 0 0 69 0
LWK 0 1 68 0
MXL 0 0 54 0
PUR 0 0 52 0
TSI 0 0 83 0
YRI 0 5 66 0
AFR 0 6 134 0
AFR+ 0 9 176 0
AMR 0 1 153 1
ASN 0 0 238 0
EUR 0 0 271 0
ALL 0 10 838 1
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2
ASW 0 3 42
CEU 0 0 66
CHB 0 0 78
CHS 0 0 91
CLM 0 1 47
FIN 0 0 62
GBR 0 0 54
IBS 0 0 6
JPT 0 0 69
LWK 0 1 68
MXL 0 0 54
PUR 0 0 51
TSI 0 0 83
YRI 0 5 66
AFR 0 6 134
AFR+ 0 9 176
AMR 0 1 152
ASN 0 0 238
EUR 0 0 271
ALL 0 10 837
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI