Variant CNV_M1_HG19_6_55413322_55417640

Location: chr6:55413322-55417640 (4.3Kb)
Site classification: Deletion
Variant DCN frequency: 0.012

Genes Overlapped
HMGCLL1 INTRON probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2	CN3
ASW	0	3	42	0
CEU	0	0	66	0
CHB	0	0	78	0
CHS	0	0	91	0
CLM	0	1	47	1
FIN	0	0	62	0
GBR	0	0	54	0
IBS	0	0	6	0
JPT	0	0	69	0
LWK	0	1	68	0
MXL	0	0	54	0
PUR	0	0	52	0
TSI	0	0	83	0
YRI	0	5	66	0

AFR	0	6	134	0
AFR+	0	9	176	0
AMR	0	1	153	1
ASN	0	0	238	0
EUR	0	0	271	0

ALL	0	10	838	1
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	3	42
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	1	47
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	1	68
MXL	0	0	54
PUR	0	0	51
TSI	0	0	83
YRI	0	5	66

AFR	0	6	134
AFR+	0	9	176
AMR	0	1	152
ASN	0	0	238
EUR	0	0	271

ALL	0	10	837
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI