Variant CNV_M1_HG19_6_55341790_55345612
Location: chr6:55341790-55345612 (3.8Kb)
Site classification: Deletion
Variant DCN frequency: 0.021
Genes Overlapped
Site classification: Deletion
Variant DCN frequency: 0.021
Genes Overlapped
| HMGCLL1 | INTRON | probable 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2 |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2
ASW 0 4 41
CEU 0 0 66
CHB 0 0 78
CHS 0 0 91
CLM 0 0 49
FIN 0 0 62
GBR 0 0 54
IBS 0 0 6
JPT 0 0 69
LWK 1 9 59
MXL 0 0 54
PUR 0 0 52
TSI 0 0 83
YRI 0 5 66
AFR 1 14 125
AFR+ 1 18 166
AMR 0 0 155
ASN 0 0 238
EUR 0 0 271
ALL 1 18 830
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2
ASW 0 3 41
CEU 0 0 66
CHB 0 0 78
CHS 0 0 91
CLM 0 0 49
FIN 0 0 62
GBR 0 0 54
IBS 0 0 6
JPT 0 0 69
LWK 1 9 59
MXL 0 0 54
PUR 0 0 52
TSI 0 0 83
YRI 0 5 64
AFR 1 14 123
AFR+ 1 17 164
AMR 0 0 155
ASN 0 0 238
EUR 0 0 271
ALL 1 17 828
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI