Variant CNV_M1_HG19_6_54846256_54851464

Location: chr6:54846256-54851464 (5.2Kb)
Site classification: Deletion
Variant DCN frequency: 0.068
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	6	39
CEU	0	7	59
CHB	0	1	77
CHS	0	0	91
CLM	1	5	43
FIN	0	6	56
GBR	1	7	46
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	1	53
PUR	1	4	47
TSI	0	13	70
YRI	0	6	65

AFR	0	6	134
AFR+	0	12	173
AMR	2	10	143
ASN	0	1	237
EUR	1	33	237

ALL	3	56	790
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	6	39
CEU	0	7	59
CHB	0	0	77
CHS	0	0	91
CLM	1	5	43
FIN	0	6	56
GBR	1	7	46
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	1	53
PUR	1	4	47
TSI	0	13	70
YRI	0	6	65

AFR	0	6	134
AFR+	0	12	173
AMR	2	10	143
ASN	0	0	237
EUR	1	33	237

ALL	3	55	790
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI