Variant CNV_M1_HG19_6_54662310_54665754

Location: chr6:54662310-54665754 (3.4Kb)
Site classification: Deletion
Variant DCN frequency: 0.043
Genes overlapped: None


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	1	8	36
CEU	0	1	65
CHB	0	0	78
CHS	0	0	91
CLM	0	2	47
FIN	0	1	61
GBR	0	1	53
IBS	0	0	6
JPT	0	0	69
LWK	1	17	51
MXL	0	2	52
PUR	0	1	51
TSI	0	1	82
YRI	0	7	64

AFR	1	24	115
AFR+	2	32	151
AMR	0	5	150
ASN	0	0	238
EUR	0	4	267

ALL	2	41	806
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	1	6	36
CEU	0	0	65
CHB	0	0	77
CHS	0	0	91
CLM	0	1	47
FIN	0	1	60
GBR	0	1	53
IBS	0	0	6
JPT	0	0	68
LWK	1	15	50
MXL	0	1	52
PUR	0	1	51
TSI	0	1	82
YRI	0	7	63

AFR	1	22	113
AFR+	2	28	149
AMR	0	3	150
ASN	0	0	236
EUR	0	3	266

ALL	2	34	801
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI