Variant CNV_M1_HG19_6_116459524_116467012

Location: chr6:116459524-116467012 (7.5Kb)
Site classification: Deletion
Variant DCN frequency: 0.001

Genes Overlapped
COL10A1 INTRON collagen alpha-1(X) chain precursor
NT5DC1 CDS 5'-nucleotidase domain-containing protein 1


1000 Genomes Phase 1


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Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	0	52
TSI	0	0	83
YRI	0	1	70

AFR	0	1	139
AFR+	0	1	184
AMR	0	0	155
ASN	0	0	238
EUR	0	0	271

ALL	0	1	848
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	0	69
MXL	0	0	54
PUR	0	0	52
TSI	0	0	83
YRI	0	1	70

AFR	0	1	139
AFR+	0	1	184
AMR	0	0	155
ASN	0	0	238
EUR	0	0	271

ALL	0	1	848
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI