Variant CNV_M1_HG19_5_20419719_20428777

Location: chr5:20419719-20428777 (9.1Kb)
Site classification: Deletion
Variant DCN frequency: 0.039

Genes Overlapped
CDH18 INTRON cadherin-18 precursor


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	5	40
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	10	59
MXL	0	0	54
PUR	0	0	52
TSI	0	1	82
YRI	0	17	54

AFR	0	27	113
AFR+	0	32	153
AMR	0	0	155
ASN	0	0	238
EUR	0	1	270

ALL	0	33	816
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	5	40
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	62
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	10	59
MXL	0	0	54
PUR	0	0	52
TSI	0	1	82
YRI	0	17	54

AFR	0	27	113
AFR+	0	32	153
AMR	0	0	155
ASN	0	0	238
EUR	0	1	270

ALL	0	33	816
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI