Variant CNV_M1_HG19_5_17598540_17607172

Location: chr5:17598540-17607172 (8.6Kb)
Site classification: Deletion
Variant DCN frequency: 0.050
Genes overlapped: None


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	7	59
CHB	0	0	78
CHS	0	3	88
CLM	0	1	48
FIN	0	7	55
GBR	0	3	51
IBS	0	0	6
JPT	0	4	65
LWK	0	10	59
MXL	0	1	53
PUR	0	2	50
TSI	0	3	80
YRI	0	3	68

AFR	0	13	127
AFR+	0	13	172
AMR	0	4	151
ASN	0	7	231
EUR	0	20	251

ALL	0	44	805
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	0	45
CEU	0	7	59
CHB	0	0	78
CHS	0	3	88
CLM	0	1	48
FIN	0	7	55
GBR	0	3	51
IBS	0	0	6
JPT	0	4	65
LWK	0	9	59
MXL	0	1	53
PUR	0	2	50
TSI	0	3	80
YRI	0	2	68

AFR	0	11	127
AFR+	0	11	172
AMR	0	4	151
ASN	0	7	231
EUR	0	20	251

ALL	0	42	805
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI