Variant CNV_M1_HG19_5_155577147_155591522

Location: chr5:155577147-155591522 (14Kb)
Site classification: Deletion
Variant DCN frequency: 0.030

Genes Overlapped
SGCD INTRON delta-sarcoglycan


1000 Genomes Phase 1


Other plot formats:   PDF  Unscaled PNG  Unscaled PDF
Diploid copy number distribution
POP	CN0	CN1	CN2
ASW	0	6	39
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	1	61
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	4	65
MXL	0	1	53
PUR	0	4	48
TSI	0	0	83
YRI	0	10	61

AFR	0	14	126
AFR+	0	20	165
AMR	0	5	150
ASN	0	0	238
EUR	0	1	270

ALL	0	26	823
    
Diploid copy number distribution (95% confident)
POP	CN0	CN1	CN2
ASW	0	6	39
CEU	0	0	66
CHB	0	0	78
CHS	0	0	91
CLM	0	0	49
FIN	0	0	60
GBR	0	0	54
IBS	0	0	6
JPT	0	0	69
LWK	0	4	65
MXL	0	1	53
PUR	0	4	48
TSI	0	0	83
YRI	0	10	61

AFR	0	14	126
AFR+	0	20	165
AMR	0	5	150
ASN	0	0	238
EUR	0	0	269

ALL	0	25	822
    

Imputation spider plots:  ASW  CEU  CHB  CHS  CLM  FIN  GBR  IBS  JPT  LWK  MXL  PUR  TSI  YRI