Variant CNV_M1_HG19_5_150224382_150246188
Location: chr5:150224382-150246188 (21Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.002
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.002
Genes Overlapped
| IRGM | CDS | immunity-related GTPase family M protein |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3 CN4 CN5
ASW 0 0 45 0 0 0
CEU 0 0 66 0 0 0
CHB 0 0 78 0 0 0
CHS 0 0 91 0 0 0
CLM 0 0 49 0 0 0
FIN 0 0 62 0 0 0
GBR 0 0 54 0 0 0
IBS 0 0 6 0 0 0
JPT 0 0 69 0 0 0
LWK 0 0 69 0 0 0
MXL 0 0 54 0 0 0
PUR 0 0 52 0 0 0
TSI 0 0 81 1 0 1
YRI 0 0 71 0 0 0
AFR 0 0 140 0 0 0
AFR+ 0 0 185 0 0 0
AMR 0 0 155 0 0 0
ASN 0 0 238 0 0 0
EUR 0 0 269 1 0 1
ALL 0 0 847 1 0 1
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3 CN4 CN5
ASW 0 0 45 0 0 0
CEU 0 0 66 0 0 0
CHB 0 0 78 0 0 0
CHS 0 0 91 0 0 0
CLM 0 0 49 0 0 0
FIN 0 0 62 0 0 0
GBR 0 0 54 0 0 0
IBS 0 0 6 0 0 0
JPT 0 0 69 0 0 0
LWK 0 0 69 0 0 0
MXL 0 0 54 0 0 0
PUR 0 0 52 0 0 0
TSI 0 0 81 1 0 1
YRI 0 0 71 0 0 0
AFR 0 0 140 0 0 0
AFR+ 0 0 185 0 0 0
AMR 0 0 155 0 0 0
ASN 0 0 238 0 0 0
EUR 0 0 269 1 0 1
ALL 0 0 847 1 0 1
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI