Variant CNV_M1_HG19_5_140794418_140808978
Location: chr5:140794418-140808978 (14Kb)
Site classification: Duplication
Variant DCN frequency: 0.004
Genes Overlapped
Site classification: Duplication
Variant DCN frequency: 0.004
Genes Overlapped
| PCDHGA1 | INTRON | protocadherin gamma-A1 isoform 1 precursor |
| PCDHGA10 | CDS | protocadherin gamma-A10 isoform 1 precursor |
| PCDHGA11 | CDS | protocadherin gamma-A11 isoform 3 precursor |
| PCDHGA2 | INTRON | protocadherin gamma subfamily A, 2 precursor |
| PCDHGA3 | INTRON | protocadherin gamma-A3 isoform 1 precursor |
| PCDHGA4 | INTRON | protocadherin gamma-A4 isoform 2 precursor |
| PCDHGA5 | INTRON | protocadherin gamma-A5 isoform 2 precursor |
| PCDHGA6 | INTRON | protocadherin gamma-A6 isoform 1 precursor |
| PCDHGA7 | INTRON | protocadherin gamma-A7 isoform 1 precursor |
| PCDHGA8 | INTRON | protocadherin gamma-A8 precursor |
| PCDHGA9 | INTRON | protocadherin gamma-A9 isoform 1 precursor |
| PCDHGB1 | INTRON | protocadherin gamma-B1 isoform 2 precursor |
| PCDHGB2 | INTRON | protocadherin gamma-B2 isoform 1 precursor |
| PCDHGB3 | INTRON | protocadherin gamma-B3 isoform 1 precursor |
| PCDHGB4 | INTRON | protocadherin gamma-B4 precursor |
| PCDHGB6 | INTRON | protocadherin gamma-B6 isoform 1 precursor |
| PCDHGB7 | CDS | protocadherin gamma-B7 isoform 2 precursor |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3
ASW 0 0 45 0
CEU 0 0 66 0
CHB 0 0 78 0
CHS 0 0 91 0
CLM 0 0 49 0
FIN 0 0 60 2
GBR 0 0 54 0
IBS 0 0 6 0
JPT 0 0 68 1
LWK 0 0 69 0
MXL 0 0 54 0
PUR 0 0 52 0
TSI 0 0 83 0
YRI 0 0 71 0
AFR 0 0 140 0
AFR+ 0 0 185 0
AMR 0 0 155 0
ASN 0 0 237 1
EUR 0 0 269 2
ALL 0 0 846 3
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3
ASW 0 0 45 0
CEU 0 0 66 0
CHB 0 0 78 0
CHS 0 0 91 0
CLM 0 0 49 0
FIN 0 0 60 2
GBR 0 0 54 0
IBS 0 0 6 0
JPT 0 0 68 1
LWK 0 0 69 0
MXL 0 0 54 0
PUR 0 0 52 0
TSI 0 0 83 0
YRI 0 0 71 0
AFR 0 0 140 0
AFR+ 0 0 185 0
AMR 0 0 155 0
ASN 0 0 237 1
EUR 0 0 269 2
ALL 0 0 846 3
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI