Variant CNV_M1_HG19_5_140721520_140726796
Location: chr5:140721520-140726796 (5.3Kb)
Site classification: Deletion
Variant DCN frequency: 0.001
Genes Overlapped
Site classification: Deletion
Variant DCN frequency: 0.001
Genes Overlapped
| PCDHGA1 | INTRON | protocadherin gamma-A1 isoform 1 precursor |
| PCDHGA2 | INTRON | protocadherin gamma subfamily A, 2 precursor |
| PCDHGA3 | CDS | protocadherin gamma-A3 isoform 1 precursor |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3
ASW 0 1 44 0
CEU 0 0 66 0
CHB 0 0 78 0
CHS 0 0 91 0
CLM 0 0 49 0
FIN 0 0 61 1
GBR 0 0 54 0
IBS 0 0 6 0
JPT 0 0 69 0
LWK 0 0 69 0
MXL 0 0 54 0
PUR 0 0 52 0
TSI 0 0 83 0
YRI 0 0 71 0
AFR 0 0 140 0
AFR+ 0 1 184 0
AMR 0 0 155 0
ASN 0 0 238 0
EUR 0 0 270 1
ALL 0 1 847 1
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2
ASW 0 1 44
CEU 0 0 66
CHB 0 0 78
CHS 0 0 91
CLM 0 0 49
FIN 0 0 61
GBR 0 0 54
IBS 0 0 6
JPT 0 0 69
LWK 0 0 69
MXL 0 0 54
PUR 0 0 52
TSI 0 0 83
YRI 0 0 71
AFR 0 0 140
AFR+ 0 1 184
AMR 0 0 155
ASN 0 0 238
EUR 0 0 270
ALL 0 1 847
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI