Variant CNV_M1_HG19_5_140212865_140222055
Location: chr5:140212865-140222055 (9.2Kb)
Site classification: Multi-allelic
Variant DCN frequency: 0.014
Genes Overlapped
Site classification: Multi-allelic
Variant DCN frequency: 0.014
Genes Overlapped
| PCDHA1 | INTRON | protocadherin alpha-1 isoform 1 precursor |
| PCDHA2 | INTRON | protocadherin alpha-2 precursor |
| PCDHA3 | INTRON | protocadherin alpha-3 precursor |
| PCDHA4 | INTRON | protocadherin alpha-4 isoform 2 precursor |
| PCDHA5 | INTRON | protocadherin alpha-5 precursor |
| PCDHA6 | INTRON | protocadherin alpha-6 |
| PCDHA7 | CDS | protocadherin alpha-7 precursor |
| PCDHA8 | CDS | protocadherin alpha-8 precursor |
1000 Genomes Phase 1
Diploid copy number distribution
POP CN0 CN1 CN2 CN3
ASW 0 0 44 1
CEU 0 2 64 0
CHB 0 0 78 0
CHS 0 1 90 0
CLM 0 0 49 0
FIN 0 3 59 0
GBR 0 1 53 0
IBS 0 0 6 0
JPT 0 0 69 0
LWK 0 3 65 1
MXL 0 0 54 0
PUR 0 1 51 0
TSI 0 0 83 0
YRI 0 2 69 0
AFR 0 5 134 1
AFR+ 0 5 178 2
AMR 0 1 154 0
ASN 0 1 237 0
EUR 0 6 265 0
ALL 0 13 834 2
Diploid copy number distribution (95% confident)
POP CN0 CN1 CN2 CN3
ASW 0 0 44 1
CEU 0 2 64 0
CHB 0 0 78 0
CHS 0 1 90 0
CLM 0 0 49 0
FIN 0 3 59 0
GBR 0 1 52 0
IBS 0 0 6 0
JPT 0 0 69 0
LWK 0 0 65 1
MXL 0 0 54 0
PUR 0 1 51 0
TSI 0 0 82 0
YRI 0 2 69 0
AFR 0 2 134 1
AFR+ 0 2 178 2
AMR 0 1 154 0
ASN 0 1 237 0
EUR 0 6 263 0
ALL 0 10 832 2
Imputation spider plots: ASW CEU CHB CHS CLM FIN GBR IBS JPT LWK MXL PUR TSI YRI